RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 CELSR2Q9HCU4 2923 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 TRAV18A0A075B6X5 111 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 A0A0A6YYD4 124 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 IGHV1-18A0A0C4DH31 117 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ZNF816-ZNF321PA0A0X1KG74 233 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 MEIOCA2RUB1 952 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 MEIS3P1A6NDR6 274 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ZNF729A6NN14 1252 aaPredicted RBP3.51□□□□□ -1.85
CD44-226ENST00000527889 DHRS7CA6NNS2 312 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 CD300LBA8K4G0 201 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 F8W036 122 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 M0R1B8 84 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 RHODO00212 210 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 CCL21O00585 134 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ANGPTL7O43827 346 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 GMDSO60547 372 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 RGS11O94810 467 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 IGKV3-15P01624 115 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 IGLV1-44P01699 117 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ALDOBP05062 364 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ERCC1P07992 297 aaPredicted RBP3.51□□□□□ -1.85
CD44-226ENST00000527889 ZNF44P15621 663 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ARSBP15848 533 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 PSMB1P20618 241 aaKnown RBP3.51□□□□□ -1.85
CD44-226ENST00000527889 SERPINA2P20848 420 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 MPV17P39210 176 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 CA7P43166 264 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 PTH2RP49190 550 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 VEGFCP49767 419 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 MMP15P51511 669 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 GPM6AP51674 278 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ELLP55199 621 aaPredicted RBP3.51□□□□□ -1.85
CD44-226ENST00000527889 MTCP1P56278 107 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 TAS2R20P59543 309 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 TAS2R60P59551 318 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ACTBP60709 375 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ACTG1P63261 375 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 PITPNAQ00169 270 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 NAAAQ02083 359 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 PRDX4Q13162 271 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 KISS1Q15726 138 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 VWC2Q2TAL6 325 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 SLC22A6Q4U2R8 563 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 TMEM255AQ5JRV8 349 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 TIMM23BQ5SRD1 257 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 TMEM69Q5SWH9 247 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 TRIQKQ629K1 86 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ZNF57Q68EA5 555 aaPredicted RBP3.51□□□□□ -1.85
CD44-226ENST00000527889 TMEM42Q69YG0 159 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 OR2T2Q6IF00 324 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 MRGPRGQ86SM5 289 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 GLCCI1Q86VQ1 547 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 CENPSQ8N2Z9 138 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 GDPD1Q8N9F7 314 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 PNLDC1Q8NA58 520 aaKnown RBP3.51□□□□□ -1.85
CD44-226ENST00000527889 ST6GALNAC3Q8NDV1 305 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 CCDC54Q8NEL0 328 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 OR1J1Q8NGS3 322 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 OR52I2Q8NH67 350 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 TNFAIP8L1Q8WVP5 186 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 PP6455Q8WZ26 134 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 RND1Q92730 232 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 C10orf35Q96D05 121 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 CMBLQ96DG6 245 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 MUCL1Q96DR8 90 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 S100A16Q96FQ6 103 aaKnown RBP3.51□□□□□ -1.85
CD44-226ENST00000527889 WBP1Q96G27 269 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 RNF170Q96K19 258 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 C1orf147Q96MC9 270 aaPredicted RBP3.51□□□□□ -1.85
CD44-226ENST00000527889 SEC22CQ9BRL7 303 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 NICN1Q9BSH3 213 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 CHRDL1Q9BU40 450 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 OR2J1Q9GZK6 312 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ABCG5Q9H222 651 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ESRP2Q9H6T0 727 aaKnown RBP3.51□□□□□ -1.85
CD44-226ENST00000527889 SRD5A3Q9H8P0 318 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ELL3Q9HB65 397 aaPredicted RBP3.51□□□□□ -1.85
CD44-226ENST00000527889 ZNF701Q9NV72 531 aaPredicted RBP3.51□□□□□ -1.85
CD44-226ENST00000527889 ONECUT1Q9UBC0 465 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ERRFI1Q9UJM3 462 aaPredicted RBP3.51□□□□□ -1.85
CD44-226ENST00000527889 ZNF391Q9UJN7 358 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ELF5Q9UKW6 265 aaPredicted RBP3.51□□□□□ -1.85
CD44-226ENST00000527889 MEMO1Q9Y316 297 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 TLN2Q9Y4G6 2542 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 ABCA1O95477 2261 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 CR1P17927 2039 aa3.51□□□□□ -1.85
CD44-226ENST00000527889 IGHV3-64DA0A0J9YX35 117 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 ISPDA4D126 451 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 CLEC18AA5D8T8 446 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 NKX2-6A6NCS4 301 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 TMEM235A6NFC5 223 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 ANKRD30BLA7E2S9 258 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 TMEM14DPA8MWL7 114 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 TMEM238C9JI98 176 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 H0YL77 283 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 C16orf97H3BN30 126 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 SMLR1H3BR10 107 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 TEX46H3BTG2 121 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 CCSO14618 274 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 MGST3O14880 152 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms