RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 AGFG2O95081 481 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 F12P00748 615 aaPredicted RBP12.95□□□□□ -0.34
USH1C-207ENST00000527720 CECR9P0C854 216 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 CEACAM1P13688 526 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 CEACAM6P40199 344 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 DYNLT3P51808 116 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 PAX9P55771 341 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 GTF3C1Q12789 2109 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 DEFB109BQ30KR1 87 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 ZNF718Q3SXZ3 478 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 C11orf53Q8IXP5 236 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 OR2G3Q8NGZ4 309 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 TOLLIPQ9H0E2 274 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 H7C2Y5 167 aa12.94□□□□□ -0.34
USH1C-207ENST00000527720 DFFBO76075 338 aa12.94□□□□□ -0.34
USH1C-207ENST00000527720 OMGP23515 440 aa12.94□□□□□ -0.34
USH1C-207ENST00000527720 FLI1Q01543 452 aaPredicted RBP12.94□□□□□ -0.34
USH1C-207ENST00000527720 HFEQ30201 348 aa12.94□□□□□ -0.34
USH1C-207ENST00000527720 MBNL2Q5VZF2 373 aaKnown RBP12.94□□□□□ -0.34
USH1C-207ENST00000527720 STX12Q86Y82 276 aa12.94□□□□□ -0.34
USH1C-207ENST00000527720 PRR18Q8N4B5 295 aa12.94□□□□□ -0.34
USH1C-207ENST00000527720 ZADH2Q8N4Q0 377 aa12.94□□□□□ -0.34
USH1C-207ENST00000527720 RNASE11Q8TAA1 199 aaKnown RBP12.94□□□□□ -0.34
USH1C-207ENST00000527720 PROCRQ9UNN8 238 aa12.94□□□□□ -0.34
USH1C-207ENST00000527720 WSB1Q9Y6I7 421 aa12.94□□□□□ -0.34
USH1C-207ENST00000527720 HEATR1Q9H583 2144 aaKnown RBP12.94□□□□□ -0.34
USH1C-207ENST00000527720 TRAV39A0A0B4J263 110 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 A0A1B0GWJ7 208 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 BTBD17A6NE02 478 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 OOEPA6NGQ2 149 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 ATP6V1G2-DDX39BF2Z307 99 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 TIMM8AO60220 97 aaPredicted RBP12.93□□□□□ -0.34
USH1C-207ENST00000527720 TNFSF13O75888 250 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 FHITP49789 147 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 ASCL1P50553 236 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 MZT1Q08AG7 82 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 FOXF2Q12947 444 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 ACP7Q6ZNF0 438 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 CXorf67Q86X51 503 aaPredicted RBP12.93□□□□□ -0.34
USH1C-207ENST00000527720 CBLN2Q8IUK8 224 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 ATP5SQ99766 215 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 AIFM2Q9BRQ8 373 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 ZNF71Q9NQZ8 489 aaPredicted RBP12.93□□□□□ -0.34
USH1C-207ENST00000527720 DKK4Q9UBT3 224 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 OR14J1Q9UGF5 321 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 PPP1R3CQ9UQK1 317 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 IFNL4K9M1U5 179 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 TXNL1O43396 289 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 PSPNO60542 156 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 CGAP01215 116 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 IGKV1-39P01597 117 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 IGKV1D-39P04432 117 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 EPHA1P21709 976 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 GCH1P30793 250 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 SULT1A1P50225 295 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 MSMO1Q15800 293 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 FAM213BQ8TBF2 198 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 GALMQ96C23 342 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 EIF5A2Q9GZV4 153 aaKnown RBP12.93□□□□□ -0.34
USH1C-207ENST00000527720 KCNS2Q9ULS6 477 aa12.93□□□□□ -0.34
USH1C-207ENST00000527720 CHD3Q12873 2000 aaKnown RBP12.93□□□□□ -0.34
USH1C-207ENST00000527720 MBD3L4A6NDZ8 208 aaPredicted RBP12.92□□□□□ -0.34
USH1C-207ENST00000527720 MBD3L3A6NE82 208 aaPredicted RBP12.92□□□□□ -0.34
USH1C-207ENST00000527720 MBD3L5A6NJ08 208 aaPredicted RBP12.92□□□□□ -0.34
USH1C-207ENST00000527720 C1QL1O75973 258 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 CST7O76096 145 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 PPT1P50897 306 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 IGFL3Q6UXB1 125 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 WDR82Q6UXN9 313 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 DPPA3Q6W0C5 159 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 BEND4Q6ZU67 534 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 DRAM1Q8N682 238 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 ZNF645Q8N7E2 425 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 MBD3L2Q8NHZ7 208 aaPredicted RBP12.92□□□□□ -0.34
USH1C-207ENST00000527720 STARD4Q96DR4 205 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 HIPK2Q9H2X6 1198 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 IGHV2OR16-5A0A0B4J2B6 119 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 ZNF585BQ52M93 769 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 BHLHA15Q7RTS1 189 aaPredicted RBP12.92□□□□□ -0.34
USH1C-207ENST00000527720 ZNF610Q8N9Z0 462 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 TAAR6Q96RI8 345 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 COA4Q9NYJ1 87 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 CACNG5Q9UF02 275 aa12.92□□□□□ -0.34
USH1C-207ENST00000527720 OR5H1A6NKK0 313 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 SYNGR2O43760 224 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 IGKV1-5P01602 117 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 PAX6P26367 422 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 TAS2R30P59541 319 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 SMIM21Q3B7S5 101 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 Q6ZR03 302 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 IGHV1-18A0A0C4DH31 117 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 A6NLC8 198 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 C12orf77C9JDV5 145 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 FAM90A26D6RGX4 464 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 PAX5Q02548 391 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 EIF2S3LQ2VIR3 472 aaKnown RBP12.91□□□□□ -0.34
USH1C-207ENST00000527720 Q6ZRM9 215 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 ZNF826PQ6ZT77 177 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 ZNF295-AS1Q8N0V1 137 aa12.91□□□□□ -0.34
USH1C-207ENST00000527720 TMEM217Q8N7C4 229 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms