RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 LYSMD2Q8IV50 215 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 IL1F10Q8WWZ1 152 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 LHX4Q969G2 390 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 YPEL2Q96QA6 119 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 CLEC7AQ9BXN2 247 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 TOLLIPQ9H0E2 274 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 AKIP1Q9NQ31 210 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 RBMX2Q9Y388 322 aaKnown RBP13.48□□□□□ -0.25
CAPN1-205ENST00000526954 TRBV6-7A0A0A0MS04 114 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 IGHV1-69DA0A0B4J2H0 117 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 IGHV1-69P01742 117 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 ZBTB25P24278 435 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 ACTBP60709 375 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 ACTG1P63261 375 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 KLRD1Q13241 179 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 MORN2Q502X0 79 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 PYDC2Q56P42 97 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 IGSF11Q5DX21 431 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 GPR157Q5UAW9 335 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 ABHD12Q8N2K0 398 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 MFSD4AQ8N468 514 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 PNKDQ8N490 385 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 C8orf31Q8N9H6 132 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 OR52L2PQ8NGH6 319 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 ZNF596Q8TC21 504 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 S100ZQ8WXG8 99 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 SRRQ9GZT4 340 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 GNG12Q9UBI6 72 aa13.47□□□□□ -0.25
CAPN1-205ENST00000526954 ZNF107Q9UII5 783 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-205ENST00000526954 IGHV3-43A0A0B4J1X8 118 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 TRAV40A0A0B4J280 105 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 ODF3BA8MYP8 253 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 RGS11O94810 467 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 IGLV1-47P01700 117 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 IGHV3-43DP0DP04 118 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 IGHV4-38-2P0DP08 117 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 HNF1AP20823 631 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 PRB3Q04118 309 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-205ENST00000526954 CHRFAM7AQ494W8 412 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 RNASE12Q5GAN4 147 aaKnown RBP13.46□□□□□ -0.25
CAPN1-205ENST00000526954 UTF1Q5T230 341 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 ZNF626Q68DY1 528 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 Q8N402 240 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 GDPD1Q8N9F7 314 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 ZNF439Q8NDP4 499 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 OR5AP2Q8NGF4 316 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 OR9G1Q8NH87 305 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 SLC23A1Q9UHI7 598 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 NUP50Q9UKX7 468 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 PSG11Q9UQ72 335 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 HIVEP2P31629 2446 aa13.46□□□□□ -0.25
CAPN1-205ENST00000526954 FAM172BPA6NC97 362 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 J3QR06 171 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 ITGB1BP1O14713 200 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 HSPA12AO43301 675 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 FCER2P06734 321 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 COX7A1P24310 79 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 CEACAM6P40199 344 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 PRRX1P54821 245 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 TAS2R46P59540 309 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 ARPC4P59998 168 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 GNMTQ14749 295 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 MIDNQ504T8 468 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 FAM53AQ6NSI3 398 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-205ENST00000526954 LINC00311Q8N616 119 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 BEND2Q8NDZ0 799 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 OR10V1Q8NGI7 309 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 OR10J5Q8NHC4 309 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 THAP7Q9BT49 309 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-205ENST00000526954 NECAP2Q9NVZ3 263 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 OR1A1Q9P1Q5 309 aa13.45□□□□□ -0.26
CAPN1-205ENST00000526954 ANK3Q12955 4377 aaKnown RBP13.45□□□□□ -0.26
CAPN1-205ENST00000526954 NPFFO15130 113 aa13.44□□□□□ -0.26
CAPN1-205ENST00000526954 BET1O15155 118 aa13.44□□□□□ -0.26
CAPN1-205ENST00000526954 PPP1CCP36873 323 aaKnown RBP13.44□□□□□ -0.26
CAPN1-205ENST00000526954 CDK10Q15131 360 aa13.44□□□□□ -0.26
CAPN1-205ENST00000526954 SLC25A48Q6ZT89 311 aaKnown RBP13.44□□□□□ -0.26
CAPN1-205ENST00000526954 OVCH2Q7RTZ1 564 aa13.44□□□□□ -0.26
CAPN1-205ENST00000526954 PDZD9Q8IXQ8 264 aa13.44□□□□□ -0.26
CAPN1-205ENST00000526954 TMEM229BQ8NBD8 167 aa13.44□□□□□ -0.26
CAPN1-205ENST00000526954 LEAP2Q969E1 77 aa13.44□□□□□ -0.26
CAPN1-205ENST00000526954 SDHCQ99643 169 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-205ENST00000526954 TAS2R8Q9NYW2 309 aa13.44□□□□□ -0.26
CAPN1-205ENST00000526954 CDC42EP3Q9UKI2 254 aa13.44□□□□□ -0.26
CAPN1-205ENST00000526954 SONP18583 2426 aaKnown RBP13.44□□□□□ -0.26
CAPN1-205ENST00000526954 IGHV3OR16-10A0A075B7F0 116 aa13.43□□□□□ -0.26
CAPN1-205ENST00000526954 TOR1AO14656 332 aa13.43□□□□□ -0.26
CAPN1-205ENST00000526954 LANCL1O43813 399 aa13.43□□□□□ -0.26
CAPN1-205ENST00000526954 IGHV3-7P01780 117 aa13.43□□□□□ -0.26
CAPN1-205ENST00000526954 CD74P04233 296 aa13.43□□□□□ -0.26
CAPN1-205ENST00000526954 ARG1P05089 322 aa13.43□□□□□ -0.26
CAPN1-205ENST00000526954 CSF1P09603 554 aa13.43□□□□□ -0.26
CAPN1-205ENST00000526954 TBPP20226 339 aa13.43□□□□□ -0.26
CAPN1-205ENST00000526954 HLA-DMAP28067 261 aa13.43□□□□□ -0.26
CAPN1-205ENST00000526954 OR3A3P47888 321 aa13.43□□□□□ -0.26
CAPN1-205ENST00000526954 ZNF134P52741 427 aa13.43□□□□□ -0.26
CAPN1-205ENST00000526954 TAS2R19P59542 299 aa13.43□□□□□ -0.26
CAPN1-205ENST00000526954 HLA-DRB5Q30154 266 aa13.43□□□□□ -0.26
CAPN1-205ENST00000526954 ACTBL2Q562R1 376 aa13.43□□□□□ -0.26
CAPN1-205ENST00000526954 CT45A1Q5HYN5 189 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms