RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMPD1-202ENST00000526280 KCNIP1Q9NZI2 227 aa10.51□□□□□ -0.73
SMPD1-202ENST00000526280 ADAM30Q9UKF2 790 aa10.51□□□□□ -0.73
SMPD1-202ENST00000526280 FAM96BQ9Y3D0 163 aa10.51□□□□□ -0.73
SMPD1-202ENST00000526280 A0A0A6YYH2 397 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 FAM172BPA6NC97 362 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 A6NJ64 397 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 SERPINE3A8MV23 424 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 SPINT2O43291 252 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 VENTXO95231 258 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 FBP1P09467 338 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 PTBP1P26599 531 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMPD1-202ENST00000526280 LGALS4P56470 323 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 LOXL3P58215 753 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 BAK1Q16611 211 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 LTC4SQ16873 150 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 CDNFQ49AH0 187 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 PYDC2Q56P42 97 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 CNIH2Q6PI25 160 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 Q6YL49 198 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 MOB1BQ7L9L4 216 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 CADM3Q8N126 398 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 OR1L1Q8NH94 360 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 C17orf50Q8WW18 174 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 ZDHHC16Q969W1 377 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 ABCG5Q9H222 651 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 ESM1Q9NQ30 184 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 GFOD1Q9NXC2 390 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 TBC1D24Q9ULP9 559 aa10.5□□□□□ -0.73
SMPD1-202ENST00000526280 TBL2Q9Y4P3 447 aaKnown RBP10.5□□□□□ -0.73
SMPD1-202ENST00000526280 SDCBPO00560 298 aaPredicted RBP10.49□□□□□ -0.73
SMPD1-202ENST00000526280 IGLV1-47P01700 117 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 GSTP1P09211 210 aaKnown RBP10.49□□□□□ -0.73
SMPD1-202ENST00000526280 CD3GP09693 182 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 IL7P13232 177 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 PRRX1P54821 245 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 HMGN3Q15651 99 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 TMEM30BQ3MIR4 351 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 ZNF260Q3ZCT1 412 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 UBE2NLQ5JXB2 153 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 LDLRAD2Q5SZI1 272 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 MINOS1Q5TGZ0 78 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 HACD4Q5VWC8 232 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 CCBE1Q6UXH8 406 aaPredicted RBP10.49□□□□□ -0.73
SMPD1-202ENST00000526280 C5orf24Q7Z6I8 188 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 LHFPL4Q7Z7J7 247 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 LDLRAD3Q86YD5 345 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 PRR18Q8N4B5 295 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 SAMD12Q8N8I0 201 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 ZDHHC22Q8N966 263 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 BEND2Q8NDZ0 799 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 OR4P4Q8NGL7 312 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 OR9G1Q8NH87 305 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 ZNF596Q8TC21 504 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 LEAP2Q969E1 77 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 PHF21AQ96BD5 680 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 MALSU1Q96EH3 234 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 JMJD8Q96S16 334 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 MEGF9Q9H1U4 602 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 Q9N2K0 584 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 DIABLOQ9NR28 239 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 ELF5Q9UKW6 265 aaPredicted RBP10.49□□□□□ -0.73
SMPD1-202ENST00000526280 MGAT4AQ9UM21 535 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 PSG11Q9UQ72 335 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 MINOS1-NBL1R4GNA1 71 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 ATRQ13535 2644 aa10.49□□□□□ -0.73
SMPD1-202ENST00000526280 TRAV18A0A075B6X5 111 aa10.48□□□□□ -0.73
SMPD1-202ENST00000526280 BOLA2-SMG1P6H3BVE0 249 aa10.48□□□□□ -0.73
SMPD1-202ENST00000526280 J3QR06 171 aa10.48□□□□□ -0.73
SMPD1-202ENST00000526280 TOR1AO14656 332 aa10.48□□□□□ -0.73
SMPD1-202ENST00000526280 IGHV3-7P01780 117 aa10.48□□□□□ -0.73
SMPD1-202ENST00000526280 MELTFP08582 738 aa10.48□□□□□ -0.73
SMPD1-202ENST00000526280 HTR1DP28221 377 aa10.48□□□□□ -0.73
SMPD1-202ENST00000526280 MRPS15P82914 257 aaKnown RBP10.48□□□□□ -0.73
SMPD1-202ENST00000526280 HTD2P86397 168 aa10.48□□□□□ -0.73
SMPD1-202ENST00000526280 BAMBIQ13145 260 aa10.48□□□□□ -0.73
SMPD1-202ENST00000526280 ARFRP1Q13795 201 aa10.48□□□□□ -0.73
SMPD1-202ENST00000526280 HLA-DRB5Q30154 266 aa10.48□□□□□ -0.73
SMPD1-202ENST00000526280 FAM53AQ6NSI3 398 aaPredicted RBP10.48□□□□□ -0.73
SMPD1-202ENST00000526280 GALMQ96C23 342 aa10.48□□□□□ -0.73
SMPD1-202ENST00000526280 S100A16Q96FQ6 103 aaKnown RBP10.48□□□□□ -0.73
SMPD1-202ENST00000526280 CMTM3Q96MX0 182 aa10.48□□□□□ -0.73
SMPD1-202ENST00000526280 ZNRD1Q9P1U0 126 aa10.48□□□□□ -0.73
SMPD1-202ENST00000526280 IGHV3-43A0A0B4J1X8 118 aa10.47□□□□□ -0.73
SMPD1-202ENST00000526280 TMEM235A6NFC5 223 aa10.47□□□□□ -0.73
SMPD1-202ENST00000526280 DNAJC9-AS1A6NH13 148 aa10.47□□□□□ -0.73
SMPD1-202ENST00000526280 FAM25AB3EWG3 89 aa10.47□□□□□ -0.73
SMPD1-202ENST00000526280 FAM25CB3EWG5 89 aa10.47□□□□□ -0.73
SMPD1-202ENST00000526280 FAM25GB3EWG6 89 aa10.47□□□□□ -0.73
SMPD1-202ENST00000526280 BUB1B-PAK6H3BSN5 160 aa10.47□□□□□ -0.73
SMPD1-202ENST00000526280 CLDN34H7C241 214 aa10.47□□□□□ -0.73
SMPD1-202ENST00000526280 HOXA3O43365 443 aaPredicted RBP10.47□□□□□ -0.73
SMPD1-202ENST00000526280 XRCC3O43542 346 aa10.47□□□□□ -0.73
SMPD1-202ENST00000526280 FCGR3AP08637 254 aa10.47□□□□□ -0.73
SMPD1-202ENST00000526280 IGHV3-43DP0DP04 118 aa10.47□□□□□ -0.73
SMPD1-202ENST00000526280 IER3P46695 156 aa10.47□□□□□ -0.73
SMPD1-202ENST00000526280 PITPNAQ00169 270 aa10.47□□□□□ -0.73
SMPD1-202ENST00000526280 SRSF2Q01130 221 aaKnown RBP10.47□□□□□ -0.73
SMPD1-202ENST00000526280 ASAH1Q13510 395 aa10.47□□□□□ -0.73
SMPD1-202ENST00000526280 SLC9A3R2Q15599 337 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms