RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 OR2S2Q9NQN1 319 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 GNG12Q9UBI6 72 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 PSG11Q9UQ72 335 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 AMMECR1Q9Y4X0 333 aaPredicted RBP16.85■□□□□ 0.29
CD44-222ENST00000526025 SSX5O60225 188 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 YPEL1O60688 119 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 HTR1DP28221 377 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 HILS1P60008 231 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 AANATQ16613 207 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 LTC4SQ16873 150 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 SIGLECL1Q8N7X8 197 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 UBALD1Q8TB05 177 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 C15orf40Q8WUR7 153 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 YPEL2Q96QA6 119 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 OCSTAMPQ9BR26 566 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 MEGF9Q9H1U4 602 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 MIXL1Q9H2W2 232 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 OCEL1Q9H607 264 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 RABL2AQ9UBK7 228 aaPredicted RBP16.84■□□□□ 0.29
CD44-222ENST00000526025 RABL2BQ9UNT1 228 aa16.84■□□□□ 0.29
CD44-222ENST00000526025 A0A1W2PRD5 423 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 A0A1W2PRF3 423 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 A0A1W2PRM7 423 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 FAM25AB3EWG3 89 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 FAM25CB3EWG5 89 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 FAM25GB3EWG6 89 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 ITGB1BP1O14713 200 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 FABP7O15540 132 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 TCF21O43680 179 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 CEACAM3P40198 252 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 MORN2Q502X0 79 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 Q6YL49 198 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 TMEM86BQ8N661 226 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 ZNF439Q8NDP4 499 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 MCFD2Q8NI22 146 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 CABLES2Q9BTV7 478 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 TOLLIPQ9H0E2 274 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 MMP27Q9H306 513 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 ZNRD1Q9P1U0 126 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 DPM3Q9P2X0 92 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 SOX21Q9Y651 276 aaPredicted RBP16.83■□□□□ 0.28
CD44-222ENST00000526025 CUBNO60494 3623 aa16.83■□□□□ 0.28
CD44-222ENST00000526025 FAM172BPA6NC97 362 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 LEUTXA8MZ59 168 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 OOSP1A8MZH6 123 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 BUB1B-PAK6H3BSN5 160 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 CLDN34H7C241 214 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 CTDSP2O14595 271 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 RGS5O15539 181 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 HLA-DQB1P01920 261 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 SCTP09683 121 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 UTF1Q5T230 341 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 FOXB2Q5VYV0 432 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 SLC25A48Q6ZT89 311 aaKnown RBP16.82■□□□□ 0.28
CD44-222ENST00000526025 LAX1Q8IWV1 398 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 IZUMO1Q8IYV9 350 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 ZDHHC16Q969W1 377 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 DCUN1D5Q9BTE7 237 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 C6orf62Q9GZU0 229 aaPredicted RBP16.82■□□□□ 0.28
CD44-222ENST00000526025 SCPEP1Q9HB40 452 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 EXTL2Q9UBQ6 330 aa16.82■□□□□ 0.28
CD44-222ENST00000526025 ZNF230Q9UIE0 474 aaPredicted RBP16.82■□□□□ 0.28
CD44-222ENST00000526025 IGHV3-43A0A0B4J1X8 118 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 A6NHS1 94 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 VGLL3A8MV65 326 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 LY6LH3BQJ8 138 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 IGHV3-43DP0DP04 118 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 ZBTB25P24278 435 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 PRSS3P35030 304 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 LDLRAD2Q5SZI1 272 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 LHFPL4Q7Z7J7 247 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 HOGA1Q86XE5 327 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 FAM216AQ8WUB2 273 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 IL1F10Q8WWZ1 152 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 LEAP2Q969E1 77 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 ANAPC10Q9UM13 185 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 POMT1Q9Y6A1 747 aa16.81■□□□□ 0.28
CD44-222ENST00000526025 IGKV1-6A0A0C4DH72 117 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 SULT1C2O00338 296 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 CTXN2P0C2S0 81 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 ZNF137PP52743 207 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 MADCAM1Q13477 382 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 GNMTQ14749 295 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 HERPUD1Q15011 391 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 CNIH2Q6PI25 160 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 OR52L2PQ8NGH6 319 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 OR10V1Q8NGI7 309 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 OR10X1Q8NGY0 326 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 C17orf50Q8WW18 174 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 SSMEM1Q8WWF3 244 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 ST6GALNAC5Q9BVH7 336 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 BATF3Q9NR55 127 aa16.8■□□□□ 0.28
CD44-222ENST00000526025 TRBV6-7A0A0A0MS04 114 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 MDFIC2A0A1B0GVS7 189 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 LPLP06858 475 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 GSTT2P0CG29 244 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 GSTT2BP0CG30 244 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 IL3RAP26951 378 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 PPP1CCP36873 323 aaKnown RBP16.79■□□□□ 0.28
CD44-222ENST00000526025 GNG10P50151 68 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms