RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 MAS1LP35410 378 aa7.78□□□□□ -1.16
CSMD1-212ENST00000523387 NPBWR2P48146 333 aa7.78□□□□□ -1.16
CSMD1-212ENST00000523387 CDC34P49427 236 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-212ENST00000523387 HNRNPA3P51991 378 aaKnown RBP7.78□□□□□ -1.16
CSMD1-212ENST00000523387 PTTG1IPP53801 180 aa7.78□□□□□ -1.16
CSMD1-212ENST00000523387 ZNF816Q0VGE8 651 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-212ENST00000523387 C1orf53Q5VUE5 145 aa7.78□□□□□ -1.16
CSMD1-212ENST00000523387 DMRTA1Q5VZB9 504 aa7.78□□□□□ -1.16
CSMD1-212ENST00000523387 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-212ENST00000523387 ZDHHC23Q8IYP9 409 aa7.78□□□□□ -1.16
CSMD1-212ENST00000523387 C11orf42Q8N5U0 333 aa7.78□□□□□ -1.16
CSMD1-212ENST00000523387 TAF15Q92804 592 aaKnown RBP eCLIP7.78□□□□□ -1.16
CSMD1-212ENST00000523387 UHRF2Q96PU4 802 aa7.78□□□□□ -1.16
CSMD1-212ENST00000523387 HSPB9Q9BQS6 159 aa7.78□□□□□ -1.16
CSMD1-212ENST00000523387 TMEM242Q9NWH2 141 aa7.78□□□□□ -1.16
CSMD1-212ENST00000523387 KNTC1P50748 2209 aa7.77□□□□□ -1.16
CSMD1-212ENST00000523387 C5orf49A4QMS7 147 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 AQP7O14520 342 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 SPINK4O60575 86 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 LINC00271P0C7V0 271 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 EDN3P14138 238 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 EGR1P18146 543 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 EDDM3BP56851 147 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 RPL23P62829 140 aaKnown RBP7.77□□□□□ -1.17
CSMD1-212ENST00000523387 ZXDAP98168 799 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 TGIF2LYQ8IUE0 185 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 TMEM170AQ8WVE7 144 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 OBSL1O75147 1896 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 KIAA1324LA8MWY0 1029 aaPredicted RBP7.77□□□□□ -1.17
CSMD1-212ENST00000523387 E9PLN8 166 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 FCN1O00602 326 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 ZNHIT1O43257 154 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 HPRT1P00492 218 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 CD27P26842 260 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 WNT5AP41221 380 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 SSR4P51571 173 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 ID3Q02535 119 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 PRDX4Q13162 271 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 SPINK9Q5DT21 86 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 D2HGDHQ8N465 521 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 OR5AU1Q8NGC0 362 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 OR5D13Q8NGL4 314 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 BORCS7Q96B45 105 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 SNHG12Q9BXW3 62 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 EFNA2O43921 213 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 UCP1P25874 307 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 SRP14P37108 136 aaKnown RBP7.77□□□□□ -1.17
CSMD1-212ENST00000523387 RND2P52198 227 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 SHHQ15465 462 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 COL5A1-AS1Q5SY13 56 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 BTNL3Q6UXE8 466 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 H2BFWTQ7Z2G1 175 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 HLA-CQ95604 372 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 TMEM56Q96MV1 263 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 RASL10BQ96S79 203 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 TMEM147Q9BVK8 224 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 PLEKHA3Q9HB20 300 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 ZNF391Q9UJN7 358 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 OR2W1Q9Y3N9 320 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 TMEM56-RWDD3S4R434 201 aa7.77□□□□□ -1.17
CSMD1-212ENST00000523387 IGKV1D-13A0A0B4J2D9 117 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 MT-CO2P00403 227 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 IGKV1-13P0DP09 117 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 CCL2P13500 99 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 MPLP40238 635 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 TGFBR3Q03167 851 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 COTL1Q14019 142 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 C5orf24Q7Z6I8 188 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 TECTBQ96PL2 329 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 PNRC2Q9NPJ4 139 aaKnown RBP7.76□□□□□ -1.17
CSMD1-212ENST00000523387 TIMM8BQ9Y5J9 83 aaPredicted RBP7.76□□□□□ -1.17
CSMD1-212ENST00000523387 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 AMTP48728 403 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 LTC4SQ16873 150 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 FAM27BQ5VT28 67 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 ETFRF1Q6IPR1 90 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 POC1BQ8TC44 478 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 SCRT1Q9BWW7 348 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 ENY2Q9NPA8 101 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 DIDO1Q9BTC0 2240 aaKnown RBP7.76□□□□□ -1.17
CSMD1-212ENST00000523387 TMEM250H0YL14 139 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 HLA-BQ31612 363 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 Q6ZN92 141 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 RABEPKQ7Z6M1 372 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 CIB3Q96Q77 187 aaPredicted RBP7.76□□□□□ -1.17
CSMD1-212ENST00000523387 PSMG3Q9BT73 122 aaPredicted RBP7.76□□□□□ -1.17
CSMD1-212ENST00000523387 OPN3Q9H1Y3 402 aaPredicted RBP7.76□□□□□ -1.17
CSMD1-212ENST00000523387 HEYLQ9NQ87 328 aaPredicted RBP7.76□□□□□ -1.17
CSMD1-212ENST00000523387 OR6C3Q9NZP0 311 aa7.76□□□□□ -1.17
CSMD1-212ENST00000523387 NDUFB4O95168 129 aa7.75□□□□□ -1.17
CSMD1-212ENST00000523387 EN2P19622 333 aaPredicted RBP7.75□□□□□ -1.17
CSMD1-212ENST00000523387 CD82P27701 267 aa7.75□□□□□ -1.17
CSMD1-212ENST00000523387 KCNMB1Q16558 191 aa7.75□□□□□ -1.17
CSMD1-212ENST00000523387 ARSJQ5FYB0 599 aaPredicted RBP7.75□□□□□ -1.17
CSMD1-212ENST00000523387 OR10G8Q8NGN5 311 aa7.75□□□□□ -1.17
CSMD1-212ENST00000523387 IGKV1-12A0A0C4DH73 117 aa7.75□□□□□ -1.17
CSMD1-212ENST00000523387 NXPH2O95156 264 aa7.75□□□□□ -1.17
CSMD1-212ENST00000523387 TMEM50AO95807 157 aa7.75□□□□□ -1.17
CSMD1-212ENST00000523387 IGKV1D-12P01611 117 aa7.75□□□□□ -1.17
CSMD1-212ENST00000523387 GDF1P27539 372 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms