RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 BET1O15155 118 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 TUSC2O75896 110 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 NDUFB6O95139 128 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 RBP4P02753 201 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 HEXAP06865 529 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 CCR6P51684 374 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 SEC61A1P61619 476 aaKnown RBP10.77□□□□□ -0.69
CPNE3-205ENST00000522240 C17orf58Q2M2W7 97 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 PLET1Q6UQ28 207 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 DHRS11Q6UWP2 260 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 IDO2Q6ZQW0 420 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 BTN2A1Q7KYR7 527 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 FAM185AQ8N0U4 392 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 CENPSQ8N2Z9 138 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 LY6G5BQ8NDX9 201 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 OR6F1Q8NGZ6 308 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 OR1L1Q8NH94 360 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 OR10J5Q8NHC4 309 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 GINS4Q9BRT9 223 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 ZNF69Q9UC07 566 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 NUBP2Q9Y5Y2 271 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 NAV3Q8IVL0 2385 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 MAP1AP78559 2803 aaPredicted RBP10.76□□□□□ -0.69
CPNE3-205ENST00000522240 ARID1AO14497 2285 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 IGHV4-61A0A0C4DH41 118 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 KIAA1324LA8MWY0 1029 aaPredicted RBP10.76□□□□□ -0.69
CPNE3-205ENST00000522240 TCRBP04435 133 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 ZNF728P0DKX0 622 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 ZBTB25P24278 435 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 FPR2P25090 351 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 SURF2Q15527 256 aaPredicted RBP10.76□□□□□ -0.69
CPNE3-205ENST00000522240 SCGB2B2Q4G0G5 96 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 TMEM200BQ69YZ2 307 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 CCBE1Q6UXH8 406 aaPredicted RBP10.76□□□□□ -0.69
CPNE3-205ENST00000522240 H1FOOQ8IZA3 346 aaPredicted RBP10.76□□□□□ -0.69
CPNE3-205ENST00000522240 PRR18Q8N4B5 295 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 ZDHHC22Q8N966 263 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 OR52M1Q8NGK5 317 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 OR13C8Q8NGS7 320 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 TERB2Q8NHR7 220 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 IL1F10Q8WWZ1 152 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 CREB3L1Q96BA8 519 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 MOB3AQ96BX8 217 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 ZNF2Q9BSG1 426 aaPredicted RBP10.76□□□□□ -0.69
CPNE3-205ENST00000522240 FXYD6Q9H0Q3 95 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 IDI2-AS1Q9NZ38 188 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 SLC23A1Q9UHI7 598 aa10.76□□□□□ -0.69
CPNE3-205ENST00000522240 POLR3KQ9Y2Y1 108 aaPredicted RBP10.76□□□□□ -0.69
CPNE3-205ENST00000522240 LOC105371242A0A075B767 164 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 PPIAL4CA0A0B4J2A2 164 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 C22orf46C9J442 243 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 HSPA12AO43301 675 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 ENSAO43768 121 aaKnown RBP10.75□□□□□ -0.69
CPNE3-205ENST00000522240 FOXH1O75593 365 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 PPYP01298 95 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 LIPFP07098 398 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 PPIAL4GP0DN37 164 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 SPNP16150 400 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 FCGR2CP31995 323 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 RAG2P55895 527 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 UCP3P55916 312 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 DLX6P56179 175 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 HERV-K104P61576 105 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 KRTAP21-3Q3LHN1 58 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 Q3ZCU0 254 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 Q5PR19 223 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 LY6G6FQ5SQ64 297 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 AADACL3Q5VUY0 350 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 HEPN1Q6WQI6 88 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 C5orf24Q7Z6I8 188 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 KIR3DL3Q8N743 410 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 UBALD1Q8TB05 177 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 MRGPRFQ96AM1 343 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 UPRTQ96BW1 309 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 SCGB3A2Q96PL1 93 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 MARVELD1Q9BSK0 173 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 C20orf85Q9H1P6 137 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 GFOD1Q9NXC2 390 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 OR1A1Q9P1Q5 309 aa10.75□□□□□ -0.69
CPNE3-205ENST00000522240 A0A096LNT2 108 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 MEX3AA1L020 520 aaKnown RBP10.74□□□□□ -0.69
CPNE3-205ENST00000522240 OR5H14A6NHG9 310 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 C17orf98A8MV24 154 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 M0R1W7 72 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 ITGB1BP1O14713 200 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 PHF1O43189 567 aaPredicted RBP10.74□□□□□ -0.69
CPNE3-205ENST00000522240 YPEL1O60688 119 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 RGS11O94810 467 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 CCL3L1P16619 93 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 AADACP22760 399 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 NFYAP23511 347 aaPredicted RBP10.74□□□□□ -0.69
CPNE3-205ENST00000522240 MECP2P51608 486 aaKnown RBP10.74□□□□□ -0.69
CPNE3-205ENST00000522240 LOXL3P58215 753 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 SPNS3Q6ZMD2 512 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 GLCCI1Q86VQ1 547 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 RFESDQ8TAC1 157 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 EDARADDQ8WWZ3 215 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 DACT3Q96B18 629 aaPredicted RBP10.74□□□□□ -0.69
CPNE3-205ENST00000522240 YPEL2Q96QA6 119 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 NUDT15Q9NV35 164 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms