RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 APOL4Q9BPW4 351 aa6.53□□□□□ -1.36
TRAPPC9-212ENST00000521944 SLA2Q9H6Q3 261 aa6.53□□□□□ -1.36
TRAPPC9-212ENST00000521944 KRT84Q9NSB2 600 aa6.53□□□□□ -1.36
TRAPPC9-212ENST00000521944 GID8Q9NWU2 228 aa6.53□□□□□ -1.36
TRAPPC9-212ENST00000521944 FBXL17Q9UF56 701 aa6.53□□□□□ -1.36
TRAPPC9-212ENST00000521944 V9GYQ6 96 aa6.53□□□□□ -1.36
TRAPPC9-212ENST00000521944 HMCN2Q8NDA2 5059 aa6.53□□□□□ -1.36
TRAPPC9-212ENST00000521944 BBIP1A8MTZ0 92 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 IGLL5B9A064 214 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 LOC110117498-PIK3R3F6TDL0 507 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 OR2A4O95047 310 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 CYB5AP00167 134 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 RIDAP52758 137 aaKnown RBP6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 MTCP1P56278 107 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 ODF4Q2M2E3 257 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 ZNF829Q3KNS6 432 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 BCL2L15Q5TBC7 163 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 METTL21CQ5VZV1 264 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 UNQ5815/PRO19632Q6UWF5 114 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 PPP1R27Q86WC6 154 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 DNAAF1Q8NEP3 725 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 OR52M1Q8NGK5 317 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 RCN3Q96D15 328 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 YIPF3Q9GZM5 350 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 CST11Q9H112 138 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 FBXL15Q9H469 300 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 GTF2A1LQ9UNN4 478 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 R4GMQ9 66 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 AGRNO00468 2067 aa6.52□□□□□ -1.37
TRAPPC9-212ENST00000521944 C16orf90A8MZG2 172 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 H0YJX3 145 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 SDCBPO00560 298 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 TXNL1O43396 289 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 LANCL1O43813 399 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 MRPL3P09001 348 aaKnown RBP6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 ATP1B3P54709 279 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 PPP1R8Q12972 351 aaKnown RBP6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 RBMS2Q15434 407 aaKnown RBP6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 TM4SF20Q53R12 229 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 ZNF343Q6P1L6 599 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 Q6ZR54 194 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 CPOQ8IVL8 374 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 ODF3L1Q8IXM7 274 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 TMEM217Q8N7C4 229 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 AQP11Q8NBQ7 271 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 OR5D18Q8NGL1 313 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 TSEN15Q8WW01 171 aaKnown RBP6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 ADAT3Q96EY9 351 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 PYURFQ96I23 114 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 ZNF251Q9BRH9 671 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 MRPL20Q9BYC9 149 aaKnown RBP6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 SAR1AQ9NR31 198 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 PEF1Q9UBV8 284 aaKnown RBP6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 ERGIC3Q9Y282 383 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 AP3M1Q9Y2T2 418 aa6.51□□□□□ -1.37
TRAPPC9-212ENST00000521944 A0A0G2JND7 137 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 C13orf42A0A1B0GVH6 325 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 CCDC182A6NF36 153 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 BMPR1BO00238 502 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 GATBO75879 557 aaKnown RBP6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 IFNA4P05014 189 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 IL3RAP26951 378 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 MAGEA2P43356 314 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 MFAP2P55001 183 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 SSBP2P81877 361 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 TMEM267Q0VDI3 215 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 LGALS9BQ3B8N2 356 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 MOGAT2Q3SYC2 334 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 PAN3Q58A45 887 aaKnown RBP6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 GLYATQ6IB77 296 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 WDR93Q6P2C0 686 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 TMEM61Q8N0U2 210 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 OR5T1Q8NG75 326 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 C11orf45Q8TAV5 145 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 CNIH3Q8TBE1 160 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 ARL11Q969Q4 196 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 DGCR6LQ9BY27 220 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 BARHL1Q9BZE3 327 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 SPAG4Q9NPE6 437 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 IL1RAPQ9NPH3 570 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 SAMD4AQ9UPU9 718 aaKnown RBP6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 SNX5Q9Y5X3 404 aa6.5□□□□□ -1.37
TRAPPC9-212ENST00000521944 C2orf70A6NJV1 201 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 RRHO14718 337 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 SYT7O43581 403 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 AIREO43918 545 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 INAFM2P0DMQ5 153 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 FOLR2P14207 255 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 ATF1P18846 271 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 GZMHP20718 246 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 RPEL1Q2QD12 228 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 Q3ZCU0 254 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 SLC35D3Q5M8T2 416 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 ZNF322Q6U7Q0 402 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 SLC16A13Q7RTY0 426 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 ARPINQ7Z6K5 226 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 POM121L12Q8N7R1 296 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 POC5Q8NA72 575 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 ASB17Q8WXJ9 295 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 NIPSNAP1Q9BPW8 284 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 288.5 ms