RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 A0A1B0GVG6 124 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 SMIM31A0A1B0GVY4 71 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 OR2AT4A6NND4 320 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 TMEM114B3SHH9 223 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 CLDN34H7C241 214 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 M0QXV9 152 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 BET1O15155 118 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 DENRO43583 198 aaKnown RBP1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 SMIM24O75264 130 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 MED6O75586 246 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 TNNC2P02585 160 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 COX4I1P13073 169 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 ZNF32P17041 273 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 TGFBR1P36897 503 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 PSMD8P48556 350 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 GRB2P62993 217 aaKnown RBP1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 HPCAP84074 193 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 TFAMQ00059 246 aaKnown RBP1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 CD164Q04900 197 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 BAXQ07812 192 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 LAMTOR4Q0VGL1 99 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 USF2Q15853 346 aaPredicted RBP1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 GOLGA7BQ2TAP0 167 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 SPANXN3Q5MJ09 141 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 NCBP2-AS2Q69YL0 99 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 PDPK2PQ6A1A2 396 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 DHRS4L2Q6PKH6 230 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 C4orf22Q6V702 233 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 SHISA6Q6ZSJ9 500 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 ZCCHC23Q6ZST2 131 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 SPATA24Q86W54 205 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 ERO1BQ86YB8 467 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 CRLF3Q8IUI8 442 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 ZBTB8OSQ8IWT0 167 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 CTAGE3PQ8IX95 158 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 ST20-AS1Q8NBB2 130 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 ZNF555Q8NEP9 628 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 ANGPTL6Q8NI99 470 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 FAM57AQ8TBR7 257 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 PYDC1Q8WXC3 89 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 CCDC124Q96CT7 223 aaKnown RBP1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 DCUN1D1Q96GG9 259 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 ANKRD36BP1Q96IX9 119 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 METTL26Q96S19 204 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 CDX2Q99626 313 aaPredicted RBP1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 SPIN2AQ99865 258 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 SPIN2BQ9BPZ2 258 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 THTPAQ9BU02 230 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 BEX2Q9BXY8 128 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 MRPS26Q9BYN8 205 aaKnown RBP1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 VCX3BQ9H321 246 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 RBM12B-AS1Q9P1G2 102 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 PRO0628Q9UI54 55 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 PSMD13Q9UNM6 376 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 POMPQ9Y244 141 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 ORC6Q9Y5N6 252 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 FADS3Q9Y5Q0 445 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 MPDZO75970 2070 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 NRCAMQ92823 1304 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 NUMA1Q14980 2115 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 IGHV1-3A0A0C4DH29 117 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 ZNF850A8MQ14 1090 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 C16orf90A8MZG2 172 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 H0YJX3 145 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 K7EM74 188 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 ZNF189O75820 626 aaPredicted RBP1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 CNMDO75829 334 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 VAMP5O95183 116 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 KLHL2O95198 593 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 TNFAIP8O95379 198 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 LDOC1O95751 146 aaPredicted RBP1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 M6PRP20645 277 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 RPS12P25398 132 aaKnown RBP1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 SDC4P31431 198 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 PRSS3P35030 304 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 HSPA13P48723 471 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 NUDT2P50583 147 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 RAB38P57729 211 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 PPP1CAP62136 330 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 MEF2CQ06413 473 aaPredicted RBP1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 MED21Q13503 144 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 FLOT2Q14254 428 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 PAFAH1B3Q15102 231 aaKnown RBP1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 CCDC153Q494R4 210 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 Q499Y3 187 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 KRTAP13-2Q52LG2 175 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 CLEC12AQ5QGZ9 265 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 ZNF678Q5SXM1 525 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 LPCAT4Q643R3 524 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 CLEC18BQ6UXF7 455 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 TPGS1Q6ZTW0 290 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 C10orf107Q8IVU9 208 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 DEFB107AQ8IZN7 70 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 CYP4Z2PQ8N1L4 340 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 STK40Q8N2I9 435 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 ZNF709Q8N972 641 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 OR4M2Q8NGB6 313 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 OR5M1Q8NGP8 315 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 OR52N1Q8NH53 320 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 OR51Q1Q8NH59 317 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms