RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 GNMTQ14749 295 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 C2orf68Q2NKX9 166 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 CT45A1Q5HYN5 189 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 UBE2UQ5VVX9 321 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 TRAT1Q6PIZ9 186 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 CD200R1LQ6Q8B3 271 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 Q6ZPA2 131 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 OR2W3Q7Z3T1 314 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 MOB3BQ86TA1 216 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 LYG1Q8N1E2 194 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 SVOPQ8N4V2 548 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 OR51D1Q8NGF3 324 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 OR52L2PQ8NGH6 319 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 CT45A3Q8NHU0 189 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 ST6GALNAC6Q969X2 333 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 RAB9BQ9NP90 201 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 OR2S2Q9NQN1 319 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 KCNIP1Q9NZI2 227 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 V9GY05 133 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 MEGF8Q7Z7M0 2845 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 IGHV1-3A0A0C4DH29 117 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 TRDV1A0A1B0GX56 115 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 PEX14O75381 377 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 IGKV1D-33P01593 117 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 IGKV1-33P01594 117 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 GAPDHP04406 335 aaKnown RBP11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 LPLP06858 475 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 CSF1P09603 554 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 TMEM11P17152 192 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 PSMB9P28065 219 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 HES1Q14469 280 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 C2orf76Q3KRA6 126 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 TMEM30BQ3MIR4 351 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 Q3ZCU0 254 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 HES5Q5TA89 166 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 SLC25A48Q6ZT89 311 aaKnown RBP11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 FAM89BQ8N5H3 189 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 FAM3DQ96BQ1 224 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 RBMXL1Q96E39 390 aaKnown RBP11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 URM1Q9BTM9 101 aaKnown RBP11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 YTHDF1Q9BYJ9 559 aaKnown RBP11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 PLEKHJ1Q9NW61 149 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 MOB4Q9Y3A3 225 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 RRP15Q9Y3B9 282 aaKnown RBP11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 LRRC42Q9Y546 428 aa11.22□□□□□ -0.61
PDGFRB-202ENST00000517488 TRAV1-2A0A0B4J238 106 aa11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 FOXI3A8MTJ6 420 aaPredicted RBP11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 LDLRAD4O15165 306 aa11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 FBXO24O75426 580 aa11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 NAPSAO96009 420 aa11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 IL3RAP26951 378 aa11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 PPP1CCP36873 323 aaKnown RBP11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 PSMD7P51665 324 aa11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 TMEM50BP56557 158 aa11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 HMGN3Q15651 99 aa11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 MORN2Q502X0 79 aa11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 ZNF554Q86TJ5 538 aa11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 RTN4IP1Q8WWV3 396 aaPredicted RBP11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 CITED2Q99967 270 aaPredicted RBP11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 HDHD3Q9BSH5 251 aaPredicted RBP11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 AK3Q9UIJ7 227 aa11.21□□□□□ -0.61
PDGFRB-202ENST00000517488 TMEM272A0A1B0GTI8 110 aa11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 ZNF736B4DX44 427 aaPredicted RBP11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 M0QZK8 103 aa11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 VEGFCP49767 419 aa11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 ZNF137PP52743 207 aa11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 HTD2P86397 168 aa11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 EBI3Q14213 229 aa11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 C9orf152Q5JTZ5 239 aa11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 C22orf42Q6IC83 251 aa11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 ZNF880Q6PDB4 577 aa11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 ZNF773Q6PK81 442 aa11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 ARHGAP5-AS1Q96IT6 56 aa11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 EAF1Q96JC9 268 aaPredicted RBP11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 CHMP1AQ9HD42 196 aaPredicted RBP11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 STEAP1Q9UHE8 339 aa11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 JPT1Q9UK76 154 aa11.2□□□□□ -0.62
PDGFRB-202ENST00000517488 NOTCH1P46531 2555 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 A0A0B4J203 849 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 IFITM5A6NNB3 132 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 ADARB2-AS1A8MUL3 147 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 PDCD5O14737 125 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 GALP22466 123 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 MYL9P24844 172 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 NSUN5P1Q3KNT7 163 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 PLAC9Q5JTB6 97 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 STEAP3Q658P3 488 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 C10orf99Q6UWK7 81 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 NR2C2APQ86WQ0 139 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 TGIF2LXQ8IUE1 241 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 IZUMO1Q8IYV9 350 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 Q8N6K4 173 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 C5orf56Q8N8D9 126 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 OR5AU1Q8NGC0 362 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 SETD6Q8TBK2 473 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 FCGR1BQ92637 280 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 GALMQ96C23 342 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 ABHD14AQ9BUJ0 271 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 PECRQ9BY49 303 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 RAB22AQ9UL26 194 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms