RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 C11orf44Q8N8P7 122 aa12.57□□□□□ -0.4
SERF1B-208ENST00000515588 CT45A3Q8NHU0 189 aa12.57□□□□□ -0.4
SERF1B-208ENST00000515588 WIPF2Q8TF74 440 aaPredicted RBP12.57□□□□□ -0.4
SERF1B-208ENST00000515588 ST6GALNAC6Q969X2 333 aa12.57□□□□□ -0.4
SERF1B-208ENST00000515588 URM1Q9BTM9 101 aaKnown RBP12.57□□□□□ -0.4
SERF1B-208ENST00000515588 GNG12Q9UBI6 72 aa12.57□□□□□ -0.4
SERF1B-208ENST00000515588 MEGF8Q7Z7M0 2845 aa12.57□□□□□ -0.4
SERF1B-208ENST00000515588 TMEM272A0A1B0GTI8 110 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 SH2D7A6NKC9 451 aaPredicted RBP12.56□□□□□ -0.4
SERF1B-208ENST00000515588 HSD17B6O14756 317 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 NAPSAO96009 420 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 SNRNP70P08621 437 aaKnown RBP12.56□□□□□ -0.4
SERF1B-208ENST00000515588 VSIG10L2P0DP72 767 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 GALP22466 123 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 REG1BP48304 166 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 RAB7AP51149 207 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 PSMD7P51665 324 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 ZNF816Q0VGE8 651 aaPredicted RBP12.56□□□□□ -0.4
SERF1B-208ENST00000515588 SLC25A48Q6ZT89 311 aaKnown RBP12.56□□□□□ -0.4
SERF1B-208ENST00000515588 ZNF554Q86TJ5 538 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 OR8H3Q8N146 312 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 DTX3Q8N9I9 347 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 OR52L2PQ8NGH6 319 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 FCGR1BQ92637 280 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 HDHD3Q9BSH5 251 aaPredicted RBP12.56□□□□□ -0.4
SERF1B-208ENST00000515588 WNT10AQ9GZT5 417 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 OR2S2Q9NQN1 319 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 PLEKHJ1Q9NW61 149 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 STEAP1Q9UHE8 339 aa12.56□□□□□ -0.4
SERF1B-208ENST00000515588 A0A0B4J203 849 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 IGHV1-3A0A0C4DH29 117 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 IFITM5A6NNB3 132 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 PDCD5O14737 125 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 FAM106CPP0CH98 169 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 MYL9P24844 172 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 VEGFCP49767 419 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 HMGN3Q15651 99 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 TMEM30BQ3MIR4 351 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 ABCA11PQ4W5N1 156 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 MORN2Q502X0 79 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 ZNF880Q6PDB4 577 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 RAB9BQ9NP90 201 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 KCNIP1Q9NZI2 227 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 AK3Q9UIJ7 227 aa12.55□□□□□ -0.4
SERF1B-208ENST00000515588 IGHV3-72A0A0B4J1Y9 119 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 SMIM30A4D0T7 59 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 M0QZ24 198 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 TSPAN15O95858 294 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 IGKV1D-33P01593 117 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 IGKV1-33P01594 117 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 GAPDHP04406 335 aaKnown RBP12.54□□□□□ -0.4
SERF1B-208ENST00000515588 RAB3BP20337 219 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 FGF9P31371 208 aaPredicted RBP12.54□□□□□ -0.4
SERF1B-208ENST00000515588 PPP1CCP36873 323 aaKnown RBP12.54□□□□□ -0.4
SERF1B-208ENST00000515588 ZNF137PP52743 207 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 HTD2P86397 168 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 HNF4GQ14541 408 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 KCTD21Q4G0X4 260 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 PLAC9Q5JTB6 97 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 Q6ZTK2 550 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 MOB3BQ86TA1 216 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 RTN4IP1Q8WWV3 396 aaPredicted RBP12.54□□□□□ -0.4
SERF1B-208ENST00000515588 RBMXL1Q96E39 390 aaKnown RBP12.54□□□□□ -0.4
SERF1B-208ENST00000515588 ARHGAP5-AS1Q96IT6 56 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 AKR1E2Q96JD6 320 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 PECRQ9BY49 303 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 TXNL4BQ9NX01 149 aaKnown RBP12.54□□□□□ -0.4
SERF1B-208ENST00000515588 HSF4Q9ULV5 492 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 STUB1Q9UNE7 303 aa12.54□□□□□ -0.4
SERF1B-208ENST00000515588 TRBV6-6A0A0A6YYG2 114 aa12.53□□□□□ -0.4
SERF1B-208ENST00000515588 VDAC2P45880 294 aaPredicted RBP12.53□□□□□ -0.4
SERF1B-208ENST00000515588 MOGAT2Q3SYC2 334 aa12.53□□□□□ -0.4
SERF1B-208ENST00000515588 STEAP3Q658P3 488 aa12.53□□□□□ -0.4
SERF1B-208ENST00000515588 OR51E2Q9H255 320 aa12.53□□□□□ -0.4
SERF1B-208ENST00000515588 CHMP1AQ9HD42 196 aaPredicted RBP12.53□□□□□ -0.4
SERF1B-208ENST00000515588 JPT1Q9UK76 154 aa12.53□□□□□ -0.4
SERF1B-208ENST00000515588 RAB22AQ9UL26 194 aa12.53□□□□□ -0.4
SERF1B-208ENST00000515588 KCNK7Q9Y2U2 307 aa12.53□□□□□ -0.4
SERF1B-208ENST00000515588 NOTCH1P46531 2555 aa12.52□□□□□ -0.4
SERF1B-208ENST00000515588 ZNF736B4DX44 427 aaPredicted RBP12.52□□□□□ -0.41
SERF1B-208ENST00000515588 YPEL1O60688 119 aa12.52□□□□□ -0.41
SERF1B-208ENST00000515588 LPLP06858 475 aa12.52□□□□□ -0.41
SERF1B-208ENST00000515588 CD28P10747 220 aa12.52□□□□□ -0.41
SERF1B-208ENST00000515588 SLC2A2P11168 524 aaPredicted RBP12.52□□□□□ -0.41
SERF1B-208ENST00000515588 TMEM11P17152 192 aa12.52□□□□□ -0.41
SERF1B-208ENST00000515588 IL3RAP26951 378 aa12.52□□□□□ -0.41
SERF1B-208ENST00000515588 EBI3Q14213 229 aa12.52□□□□□ -0.41
SERF1B-208ENST00000515588 HES1Q14469 280 aa12.52□□□□□ -0.41
SERF1B-208ENST00000515588 NEDD8Q15843 81 aa12.52□□□□□ -0.41
SERF1B-208ENST00000515588 ODF3L1Q8IXM7 274 aa12.52□□□□□ -0.41
SERF1B-208ENST00000515588 OR56B1Q8NGI3 324 aa12.52□□□□□ -0.41
SERF1B-208ENST00000515588 SETD6Q8TBK2 473 aa12.52□□□□□ -0.41
SERF1B-208ENST00000515588 GALMQ96C23 342 aa12.52□□□□□ -0.41
SERF1B-208ENST00000515588 YPEL2Q96QA6 119 aa12.52□□□□□ -0.41
SERF1B-208ENST00000515588 MOB4Q9Y3A3 225 aa12.52□□□□□ -0.41
SERF1B-208ENST00000515588 TET2Q6N021 2002 aaPredicted RBP12.51□□□□□ -0.41
SERF1B-208ENST00000515588 M0QZK8 103 aa12.51□□□□□ -0.41
SERF1B-208ENST00000515588 ARSJQ5FYB0 599 aaPredicted RBP12.51□□□□□ -0.41
SERF1B-208ENST00000515588 LY6G6FQ5SQ64 297 aa12.51□□□□□ -0.41
SERF1B-208ENST00000515588 IZUMO1Q8IYV9 350 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms