RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 SMR3AQ99954 134 aa17.15■□□□□ 0.34
LSM6-207ENST00000515311 THAP7Q9BT49 309 aaPredicted RBP17.15■□□□□ 0.34
LSM6-207ENST00000515311 SUCNR1Q9BXA5 334 aa17.15■□□□□ 0.34
LSM6-207ENST00000515311 WDR12Q9GZL7 423 aaKnown RBP17.15■□□□□ 0.34
LSM6-207ENST00000515311 OR2S2Q9NQN1 319 aa17.15■□□□□ 0.34
LSM6-207ENST00000515311 GNG12Q9UBI6 72 aa17.15■□□□□ 0.34
LSM6-207ENST00000515311 TRBV6-7A0A0A0MS04 114 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 AVPP01185 164 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 FCER2P06734 321 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 HOXB4P17483 251 aaPredicted RBP17.14■□□□□ 0.33
LSM6-207ENST00000515311 ZNF846Q147U1 533 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 LTC4SQ16873 150 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 ACTBL2Q562R1 376 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 LY6G6FQ5SQ64 297 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 CLEC9AQ6UXN8 241 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 C1orf229Q6ZS94 237 aaPredicted RBP17.14■□□□□ 0.33
LSM6-207ENST00000515311 TMEM229BQ8NBD8 167 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 OR10J5Q8NHC4 309 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 SDHCQ99643 169 aaPredicted RBP17.14■□□□□ 0.33
LSM6-207ENST00000515311 YAE1D1Q9NRH1 226 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 NECAP2Q9NVZ3 263 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 TMEM160Q9NX00 188 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 SLC23A1Q9UHI7 598 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 F8P00451 2351 aa17.14■□□□□ 0.33
LSM6-207ENST00000515311 IGHV2-26A0A0B4J1V2 119 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 ZNF736B4DX44 427 aaPredicted RBP17.13■□□□□ 0.33
LSM6-207ENST00000515311 RNASEK-C17orf49H0YIS7 233 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 YPEL1O60688 119 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 RGS11O94810 467 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 CSF1P09603 554 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 CD40LGP29965 261 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 PPP5CP53041 499 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 CDK10Q15131 360 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 HCP5Q6MZN7 132 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 C8orf31Q8N9H6 132 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 OR11H6Q8NGC7 330 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 OR52L2PQ8NGH6 319 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 YPEL2Q96QA6 119 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 CLEC7AQ9BXN2 247 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 TOLLIPQ9H0E2 274 aa17.13■□□□□ 0.33
LSM6-207ENST00000515311 IGHV3-43A0A0B4J1X8 118 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 ANKRD20A5PA0PJZ0 165 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 BET1O15155 118 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 HSPA12AO43301 675 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 LANCL1O43813 399 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 IGHV3-43DP0DP04 118 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 HLA-DMAP28067 261 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 UBE2E1P51965 193 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 DLX1P56177 255 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 TAS2R19P59542 299 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 GNMTQ14749 295 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 MORN2Q502X0 79 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 ABHD12Q8N2K0 398 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 OR5H2Q8NGV7 314 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 LHX4Q969G2 390 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 GINS4Q9BRT9 223 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 CCDC32Q9BV29 185 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 OR1A1Q9P1Q5 309 aa17.12■□□□□ 0.33
LSM6-207ENST00000515311 CENPVL3A0A0U1RRI6 287 aa17.11■□□□□ 0.33
LSM6-207ENST00000515311 FSHBP01225 129 aa17.11■□□□□ 0.33
LSM6-207ENST00000515311 COX7A1P24310 79 aa17.11■□□□□ 0.33
LSM6-207ENST00000515311 HRH1P35367 487 aa17.11■□□□□ 0.33
LSM6-207ENST00000515311 PPP1CCP36873 323 aaKnown RBP17.11■□□□□ 0.33
LSM6-207ENST00000515311 OR3A3P47888 321 aa17.11■□□□□ 0.33
LSM6-207ENST00000515311 KLRD1Q13241 179 aa17.11■□□□□ 0.33
LSM6-207ENST00000515311 FAM120AOSQ5T036 256 aa17.11■□□□□ 0.33
LSM6-207ENST00000515311 UTF1Q5T230 341 aa17.11■□□□□ 0.33
LSM6-207ENST00000515311 OVCH2Q7RTZ1 564 aa17.11■□□□□ 0.33
LSM6-207ENST00000515311 PNKDQ8N490 385 aa17.11■□□□□ 0.33
LSM6-207ENST00000515311 OR10V1Q8NGI7 309 aa17.11■□□□□ 0.33
LSM6-207ENST00000515311 OR9G1Q8NH87 305 aa17.11■□□□□ 0.33
LSM6-207ENST00000515311 PSG11Q9UQ72 335 aa17.11■□□□□ 0.33
LSM6-207ENST00000515311 TRAV40A0A0B4J280 105 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 FAM172BPA6NC97 362 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 ITGB1BP1O14713 200 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 CD74P04233 296 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 CD3DP04234 171 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 OR5H8P0DN80 308 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 CEACAM6P40199 344 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 AP3S2P59780 193 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 PRB3Q04118 309 aaPredicted RBP17.1■□□□□ 0.33
LSM6-207ENST00000515311 DYRK1AQ13627 763 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 BAK1Q16611 211 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 KLF17Q5JT82 389 aaPredicted RBP17.1■□□□□ 0.33
LSM6-207ENST00000515311 VAX1Q5SQQ9 334 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 GPR157Q5UAW9 335 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 TRIQKQ629K1 86 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 ZNF626Q68DY1 528 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 H1FOOQ8IZA3 346 aaPredicted RBP17.1■□□□□ 0.33
LSM6-207ENST00000515311 ZNF439Q8NDP4 499 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 BEND2Q8NDZ0 799 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 NANPQ8TBE9 248 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 ZNF596Q8TC21 504 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 FAM216AQ8WUB2 273 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 EDARADDQ8WWZ3 215 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 DEDD2Q8WXF8 326 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 LEAP2Q969E1 77 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 EHFQ9NZC4 300 aa17.1■□□□□ 0.33
LSM6-207ENST00000515311 IGHV1-69DA0A0B4J2H0 117 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 ODF3BA8MYP8 253 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms