RNA–Protein interactions for RNA: ENST00000515056.5

APBB3-221, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 2

Gene APBB3, Length 2,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-221	ENST00000515056	ZNF850	A8MQ14	1090 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	ZNF728	P0DKX0	622 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	FGF7	P21781	194 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	IL2RG	P31785	369 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	CA7	P43166	264 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	NKX6-1	P78426	367 aa	Predicted RBP	12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	RNPS1	Q15287	305 aa	Known RBP	12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	ZNF674	Q2M3X9	581 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	MIDN	Q504T8	468 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	FBXL14	Q8N1E6	418 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	C9orf106	Q8NAJ2	232 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	BHLHE23	Q8NDY6	225 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	OR51F2	Q8NH61	342 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	PBDC1	Q9BVG4	233 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	SUCNR1	Q9BXA5	334 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	ARV1	Q9H2C2	271 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	NAA60	Q9H7X0	242 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	ZNF286A	Q9HBT8	521 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	ST3GAL6	Q9Y274	331 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	INTS1	Q8N201	2190 aa	Known RBP	12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	DIDO1	Q9BTC0	2240 aa	Known RBP	12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	HIVEP3	Q5T1R4	2406 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	MBD3L3	A6NE82	208 aa	Predicted RBP	12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	DVL1	O14640	695 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	GEMIN2	O14893	280 aa	Known RBP	12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	MRPL33	O75394	65 aa	Known RBP	12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	DEDD	O75618	318 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	MB	P02144	154 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	MALL	Q13021	153 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	JOSD1	Q15040	202 aa	Predicted RBP	12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	SRSF7	Q16629	238 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	GGNBP1	Q5YKI7	109 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	PLCXD3	Q63HM9	321 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	MCEMP1	Q8IX19	187 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	TUSC5	Q8IXB3	177 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	EIF5A2	Q9GZV4	153 aa	Known RBP	12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	LIME1	Q9H400	295 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	PLEKHA2	Q9HB19	425 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	FREM1	Q5H8C1	2179 aa		12.5	□□□□□ -0.41
APBB3-221	ENST00000515056	DANCR	P0C864	163 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	GLI4	P10075	376 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	FUT3	P21217	361 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	GNLY	P22749	145 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	TIMP3	P35625	211 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	RBM11	P57052	281 aa	Known RBP	12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	PIGP	P57054	158 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	S100A10	P60903	97 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	TMEM187	Q14656	261 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	TSPO2	Q5TGU0	170 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056		Q6ZS49	121 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	SAXO1	Q8IYX7	474 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	CD300LF	Q8TDQ1	290 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	PIGC	Q92535	297 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	VKORC1	Q9BQB6	163 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	SYT3	Q9BQG1	590 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	AMDHD2	Q9Y303	409 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	TGOLN2	O43493	480 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	RPL12	P30050	165 aa	Known RBP	12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	OPRM1	P35372	400 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	ELOB	Q15370	118 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	C21orf62-AS1	Q17RA5	79 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	SLC22A25	Q6T423	547 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	GCNT2	Q8N0V5	402 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	PRR7	Q8TB68	274 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	RNASEH2C	Q8TDP1	164 aa	Known RBP	12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	GMPPA	Q96IJ6	420 aa	Predicted RBP	12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	SIRT7	Q9NRC8	400 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	GLRX2	Q9NS18	164 aa		12.49	□□□□□ -0.41
APBB3-221	ENST00000515056	SMCO3	A2RU48	225 aa		12.48	□□□□□ -0.41
APBB3-221	ENST00000515056		K7EPK0	472 aa		12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	SEC11B	P0C7V7	166 aa		12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	CEACAM8	P31997	349 aa	Predicted RBP	12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	UQCRFS1	P47985	274 aa		12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	FOXF2	Q12947	444 aa		12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	PIGY	Q3MUY2	71 aa		12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	ABCA11P	Q4W5N1	156 aa		12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	GFI1B	Q5VTD9	330 aa		12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	CYB5R2	Q6BCY4	276 aa		12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	FAM71E2	Q8N5Q1	922 aa		12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	CPEB3	Q8NE35	698 aa	Known RBP	12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	MOB3A	Q96BX8	217 aa		12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	PACRG	Q96M98	296 aa	Predicted RBP	12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	REPIN1	Q9BWE0	567 aa	Known RBP	12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	GP6	Q9HCN6	339 aa		12.48	□□□□□ -0.41
APBB3-221	ENST00000515056	CCL21	O00585	134 aa		12.47	□□□□□ -0.41
APBB3-221	ENST00000515056	SNRPC	P09234	159 aa	Known RBP	12.47	□□□□□ -0.41
APBB3-221	ENST00000515056	FABP4	P15090	132 aa		12.47	□□□□□ -0.41
APBB3-221	ENST00000515056	ARF1	P84077	181 aa	Known RBP	12.47	□□□□□ -0.41
APBB3-221	ENST00000515056	LIAT1	Q6ZQX7	453 aa		12.47	□□□□□ -0.41
APBB3-221	ENST00000515056		Q8WTZ3	238 aa		12.47	□□□□□ -0.41
APBB3-221	ENST00000515056	MRPL24	Q96A35	216 aa	Known RBP	12.47	□□□□□ -0.41
APBB3-221	ENST00000515056	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.47	□□□□□ -0.41
APBB3-221	ENST00000515056	STRAP	Q9Y3F4	350 aa	Known RBP	12.47	□□□□□ -0.41
APBB3-221	ENST00000515056	MMP24	Q9Y5R2	645 aa		12.47	□□□□□ -0.41
APBB3-221	ENST00000515056		E5RGE8	158 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms