RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 EGFEM1PQ0D2K5 195 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 ECH1Q13011 328 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 KCNJ11Q14654 390 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 SNRNP35Q16560 246 aaKnown RBP2.73□□□□□ -1.97
NUP54-209ENST00000510569 TRMT12Q53H54 448 aaKnown RBP2.73□□□□□ -1.97
NUP54-209ENST00000510569 TPTE2P1Q5T6R2 138 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 SYT6Q5T7P8 510 aaPredicted RBP2.73□□□□□ -1.97
NUP54-209ENST00000510569 FAM78BQ5VT40 261 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 UBE2UQ5VVX9 321 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 TNFAIP8L2Q6P589 184 aaPredicted RBP2.73□□□□□ -1.97
NUP54-209ENST00000510569 TMEM205Q6UW68 189 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 EPGNQ6UW88 154 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 HIST2H3AQ71DI3 136 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 TCF24Q7RTU0 167 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 GRINAQ7Z429 371 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 GALNT10Q86SR1 603 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 PPP1R27Q86WC6 154 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 PIANPQ8IYJ0 282 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 SLC35F6Q8N357 371 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 SVOPLQ8N434 492 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 ZADH2Q8N4Q0 377 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 MMGT1Q8N4V1 131 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 SMIM20Q8N5G0 67 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 OR4K15Q8NH41 348 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 CD200R1Q8TD46 325 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 ASB13Q8WXK3 278 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 RDH5Q92781 318 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 DCPSQ96C86 337 aaKnown RBP2.73□□□□□ -1.97
NUP54-209ENST00000510569 DDIT4LQ96D03 193 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 DYNLL2Q96FJ2 89 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 PYURFQ96I23 114 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 SIGMAR1Q99720 223 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 ARHGDIGQ99819 225 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 MED18Q9BUE0 208 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 MS4A6AQ9H2W1 248 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 CLMPQ9H6B4 373 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 WFDC1Q9HC57 220 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 EHFQ9NZC4 300 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 TRAPPC4Q9Y296 219 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 LSM5Q9Y4Y9 91 aaKnown RBP2.73□□□□□ -1.97
NUP54-209ENST00000510569 OR51B2Q9Y5P1 312 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 CEP350Q5VT06 3117 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 LOXHD1Q8IVV2 1947 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 CLUHO75153 1309 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 TGIF2-C20orf24A0A0A6YYL0 155 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 DHRS7CA6NNS2 312 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 BTNL10A8MVZ5 291 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 FAM25AB3EWG3 89 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 FAM25CB3EWG5 89 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 FAM25GB3EWG6 89 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 LOC110117498-PIK3R3F6TDL0 507 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 M0R1B8 84 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 SLC17A3O00476 420 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 DLEU1O43261 78 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 PDE6DO43924 150 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 SERPINB7O75635 380 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 KLF8O95600 359 aaPredicted RBP2.72□□□□□ -1.97
NUP54-209ENST00000510569 HPRT1P00492 218 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 KLK3P07288 261 aaPredicted RBP2.72□□□□□ -1.97
NUP54-209ENST00000510569 CRYGDP07320 174 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 OR13C7P0DN81 318 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 SLC2A5P22732 501 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 CXCR1P25024 350 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 GCLMP48507 274 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 UBE2E1P51965 193 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 OR12D2P58182 307 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 GNG2P59768 71 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 C1QTNF8P60827 252 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 ELF3P78545 371 aaPredicted RBP2.72□□□□□ -1.97
NUP54-209ENST00000510569 ZNF154Q13106 437 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 PPP1R1AQ13522 171 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 CLINT1Q14677 625 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 ACSBG2Q5FVE4 666 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 C9orf64Q5T6V5 341 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 GPRC6AQ5T6X5 926 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 TOMM20LQ6UXN7 152 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 FAM231DQ6ZW35 169 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 LRRC28Q86X40 367 aaPredicted RBP2.72□□□□□ -1.97
NUP54-209ENST00000510569 LYPD1Q8N2G4 141 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 PNKDQ8N490 385 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 OR5AR1Q8NGP9 310 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 OR1L8Q8NGR8 309 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 OR13G1Q8NGZ3 307 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 OR51Q1Q8NH59 317 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 OR13C6PQ8NH95 151 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 ZFAND1Q8TCF1 268 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 ABHD3Q8WU67 409 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 DNAJC9Q8WXX5 260 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 RGP1Q92546 391 aaPredicted RBP2.72□□□□□ -1.97
NUP54-209ENST00000510569 TMEM203Q969S6 136 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 ZMYND19Q96E35 227 aaPredicted RBP2.72□□□□□ -1.97
NUP54-209ENST00000510569 UBE2E2Q96LR5 201 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 GINS3Q9BRX5 216 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 MS4A8Q9BY19 250 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 ACTR6Q9GZN1 396 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 DCSTAMPQ9H295 470 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 OR51I1Q9H343 314 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 FAM96AQ9H5X1 160 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 RPF2Q9H7B2 306 aaKnown RBP2.72□□□□□ -1.97
NUP54-209ENST00000510569 MARCH5Q9NX47 278 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms