RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 RNFT1Q5M7Z0 435 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 RBMXL1Q96E39 390 aaKnown RBP15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 CACNG5Q9UF02 275 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 FAM186AA6NE01 2351 aa15.19■□□□□ 0.02
CCHCR1-228ENST00000509552 A0A1W2PR80 420 aa15.19■□□□□ 0.02
CCHCR1-228ENST00000509552 A6NLC8 198 aa15.19■□□□□ 0.02
CCHCR1-228ENST00000509552 CELA3BP08861 270 aa15.19■□□□□ 0.02
CCHCR1-228ENST00000509552 IDH3GP51553 393 aaPredicted RBP15.19■□□□□ 0.02
CCHCR1-228ENST00000509552 ATP1A1-AS1Q5TC04 95 aa15.19■□□□□ 0.02
CCHCR1-228ENST00000509552 ZDHHC11Q9H8X9 412 aa15.19■□□□□ 0.02
CCHCR1-228ENST00000509552 ESPL1Q14674 2120 aa15.19■□□□□ 0.02
CCHCR1-228ENST00000509552 GPR179Q6PRD1 2367 aa15.19■□□□□ 0.02
CCHCR1-228ENST00000509552 KIAA1324LA8MWY0 1029 aaPredicted RBP15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 CDIPTO14735 213 aa15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 SYNGR2O43760 224 aa15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 IGLV2-14P01704 120 aa15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 PGA5P0DJD9 388 aa15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 ZNF16P17020 682 aaPredicted RBP15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 CD200P41217 278 aa15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 SNRPEP62304 92 aaKnown RBP15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 TMEM267Q0VDI3 215 aaPredicted RBP15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 HAGHQ16775 308 aa15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 MYPOPQ86VE0 399 aaPredicted RBP15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 THNSL2Q86YJ6 484 aa15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 ARG1P05089 322 aa15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 RAC2P15153 192 aa15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 RAB5AP20339 215 aa15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 ZNF146Q15072 292 aa15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 IZUMO4Q1ZYL8 232 aa15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 FIP1L1Q6UN15 594 aaKnown RBP15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 BCL2L14Q9BZR8 327 aa15.18■□□□□ 0.02
CCHCR1-228ENST00000509552 IGKV1-39P01597 117 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 IGKV1D-39P04432 117 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 SELEP16581 610 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 AGAP20933 346 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 CEACAM6P40199 344 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 GABRA6Q16445 453 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 EIF2S3LQ2VIR3 472 aaKnown RBP15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 Q6ZRM9 215 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 FAM24BQ8N5W8 94 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 SLC25A40Q8TBP6 338 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 SCGB1C1Q8TD33 95 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 HIPK2Q9H2X6 1198 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 MBNL3Q9NUK0 354 aaKnown RBP15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 WIPI2Q9Y4P8 454 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 A0A1W2PPE2 198 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 WDR1O75083 606 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 SRP19P09132 144 aaKnown RBP15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 IGHV1-2P23083 117 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 CEBPGP53567 150 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 ERVS71-1P61550 626 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 PSENENQ9NZ42 101 aa15.17■□□□□ 0.02
CCHCR1-228ENST00000509552 RNF212BA8MTL3 300 aa15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 SCAF4O95104 1147 aaKnown RBP15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 HSPB1P04792 205 aaKnown RBP15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 GRPP07492 148 aa15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 ZNF506Q5JVG8 444 aa15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 ZNF295-AS1Q8N0V1 137 aa15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 UBALD1Q8TB05 177 aa15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 KCNIP1Q9NZI2 227 aa15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 OR14J1Q9UGF5 321 aa15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 TMEM210A6NLX4 147 aa15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 IQCF6A8MYZ5 107 aa15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 IGKV1-5P01602 117 aa15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 IAPPP10997 89 aa15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 MEOX2P50222 304 aa15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 SP5Q6BEB4 398 aaPredicted RBP15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 TMPRSS7Q7RTY8 843 aa15.16■□□□□ 0.02
CCHCR1-228ENST00000509552 hCG_1809904A0A1W2PP81 198 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 A0A1W2PR64 198 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 A0A1W2PRV1 198 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 H3BQ15 152 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 LYZL6O75951 148 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 OR2C1O95371 312 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 HBG1P69891 147 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 HBG2P69892 147 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 ICAM4Q14773 271 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 INO80CQ6PI98 192 aaPredicted RBP15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 NCOR1O75376 2440 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 MED12LQ86YW9 2145 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 IGHV3-64DA0A0J9YX35 117 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 C5orf52A6NGY3 159 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 HAND1O96004 215 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 PSG7Q13046 419 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 ALKBH6Q3KRA9 238 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 ZNF585BQ52M93 769 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 ADAM5Q6NVV9 412 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 DRAM1Q8N682 238 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 CLDND2Q8NHS1 167 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 TMEM9BQ9NQ34 198 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 RNF150Q9ULK6 438 aa15.15■□□□□ 0.02
CCHCR1-228ENST00000509552 METTL15P1P0C7V9 234 aa15.14■□□□□ 0.01
CCHCR1-228ENST00000509552 TNFSF10P50591 281 aa15.14■□□□□ 0.01
CCHCR1-228ENST00000509552 RPS23P62266 143 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-228ENST00000509552 PMP22Q01453 160 aa15.14■□□□□ 0.01
CCHCR1-228ENST00000509552 KHDC3LQ587J8 217 aa15.14■□□□□ 0.01
CCHCR1-228ENST00000509552 GCNT2Q8N0V5 402 aa15.14■□□□□ 0.01
CCHCR1-228ENST00000509552 MALSU1Q96EH3 234 aa15.14■□□□□ 0.01
CCHCR1-228ENST00000509552 OBP2BQ9NPH6 170 aa15.14■□□□□ 0.01
CCHCR1-228ENST00000509552 TRAV1-1A0A0B4J248 108 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms