RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 ZDHHC23Q8IYP9 409 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 IL1F10Q8WWZ1 152 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 CLDN23Q96B33 292 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 ADGRG7Q96K78 797 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 REPIN1Q9BWE0 567 aaKnown RBP11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 ZNF552Q9H707 407 aaPredicted RBP11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 PRDM6Q9NQX0 595 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 VAX2Q9UIW0 290 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 OR2W1Q9Y3N9 320 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 MAP1LC3B2A6NCE7 125 aa11.42□□□□□ -0.58
SNCAIP-209ENST00000508017 ARGFXA6NJG6 315 aa11.42□□□□□ -0.58
SNCAIP-209ENST00000508017 SYNGR2O43760 224 aa11.42□□□□□ -0.58
SNCAIP-209ENST00000508017 IGKV1-5P01602 117 aa11.42□□□□□ -0.58
SNCAIP-209ENST00000508017 CTXN2P0C2S0 81 aa11.42□□□□□ -0.58
SNCAIP-209ENST00000508017 CLEC12BQ2HXU8 276 aa11.42□□□□□ -0.58
SNCAIP-209ENST00000508017 DNLZQ5SXM8 178 aa11.42□□□□□ -0.58
SNCAIP-209ENST00000508017 RIPPLY2Q5TAB7 128 aa11.42□□□□□ -0.58
SNCAIP-209ENST00000508017 C16orf82Q7Z2V1 217 aa11.42□□□□□ -0.58
SNCAIP-209ENST00000508017 AGBL5Q8NDL9 886 aa11.42□□□□□ -0.58
SNCAIP-209ENST00000508017 OR10A7Q8NGE5 316 aa11.42□□□□□ -0.58
SNCAIP-209ENST00000508017 UBALD1Q8TB05 177 aa11.42□□□□□ -0.58
SNCAIP-209ENST00000508017 MAP1LC3BQ9GZQ8 125 aa11.42□□□□□ -0.58
SNCAIP-209ENST00000508017 PITPNC1Q9UKF7 332 aa11.42□□□□□ -0.58
SNCAIP-209ENST00000508017 TNRC6AQ8NDV7 1962 aaKnown RBP11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 C5orf49A4QMS7 147 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 ZNF503-AS2A6NEH8 195 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 HMGB3O15347 200 aaKnown RBP11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 AMBPP02760 352 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 FGF5P12034 268 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 TUBG1P23258 451 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 FOXG1P55316 489 aaPredicted RBP11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 CEACAM21Q3KPI0 293 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 OR10J5Q8NHC4 309 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 POM121Q96HA1 1249 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 GPR87Q9BY21 358 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 PRRG4Q9BZD6 226 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 PPP1R3CQ9UQK1 317 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 TRAV24A0A0B4J272 114 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 LRRC3CA6NJW4 275 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 LILRA1O75019 489 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 IGKV1D-33P01593 117 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 IGKV1-33P01594 117 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 IGLV2-14P01704 120 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 GZMBP10144 247 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 CCL4P13236 92 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 GZMHP20718 246 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 CD81P60033 236 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 SSTP61278 116 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 ERVS71-1P61550 626 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 ARF1P84077 181 aaKnown RBP11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 COL19A1Q14993 1142 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 LRRC75BQ2VPJ9 315 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 HLA-BQ31612 363 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 MRPL21Q7Z2W9 205 aaKnown RBP11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 MRGPRGQ86SM5 289 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 TMEM183AQ8IXX5 376 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 MKXQ8IYA7 352 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 SAXO1Q8IYX7 474 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 LILRB2Q8N423 598 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 KCNE4Q8WWG9 221 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 OR4C12Q96R67 309 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 P2RX4Q99571 388 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 SMIM7Q9BQ49 75 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 PSMG3Q9BT73 122 aaPredicted RBP11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 DOCK7Q96N67 2140 aa11.41□□□□□ -0.58
SNCAIP-209ENST00000508017 UBE2L5PA0A1B0GUS4 154 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 CD300LBA8K4G0 201 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 TGOLN2O43493 480 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 ZNF737O75373 536 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 NGFP01138 241 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 SELLP14151 372 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 ZNF16P17020 682 aaPredicted RBP11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 P2RY6Q15077 328 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 TMEM41BQ5BJD5 291 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 SPANXN5Q5MJ07 72 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 NCR3LG1Q68D85 454 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 PRR18Q8N4B5 295 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 OR5R1Q8NH85 324 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 PSMF1Q92530 271 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 ELOVL1Q9BW60 279 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 LAMP3Q9UQV4 416 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 SLC31A2O15432 143 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 P04436 131 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 PFN1P07737 140 aaKnown RBP11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 CYC1P08574 325 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 SLC25A6P12236 298 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 S100GP29377 79 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 RTP5Q14D33 572 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 JOSD1Q15040 202 aaPredicted RBP11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 RPUSD4Q96CM3 377 aaKnown RBP11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 WDR61Q9GZS3 305 aaKnown RBP11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 CTDSP1Q9GZU7 261 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 SRD5A3Q9H8P0 318 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 DEPPQ9NTK1 212 aa11.4□□□□□ -0.58
SNCAIP-209ENST00000508017 PINLYPA6NC86 204 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 IFNA10P01566 189 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 SNRPCP09234 159 aaKnown RBP11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 PAX1P15863 534 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 RPP25LQ8N5L8 163 aaKnown RBP11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 OR10V1Q8NGI7 309 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms