RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 OR10V1Q8NGI7 309 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 OR51T1Q8NGJ9 327 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 GRPEL2Q8TAA5 225 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 PLPPR1Q8TBJ4 325 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 CCDC107Q8WV48 283 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 ZNF503Q96F45 646 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 CLUHP3Q96NS8 147 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 NEK6Q9HC98 313 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 SPAG4Q9NPE6 437 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 GFOD1Q9NXC2 390 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 IL20Q9NYY1 176 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 OR52A1Q9UKL2 312 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 IKZF2Q9UKS7 526 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 TRAV10A0A0B4J240 114 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 KIR2DL5BA0A0G2JN68 375 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 KIR2DL5BA0A0G2JPC4 375 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 RRHO14718 337 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 LANCL1O43813 399 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 NDUFA3O95167 84 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 NCK1P16333 377 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 AADACP22760 399 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 HLA-DMBP28068 263 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 RPS7P62081 194 aaKnown RBP5.28□□□□□ -1.56
VCAN-207ENST00000507162 SPATS1Q496A3 300 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 CT45A1Q5HYN5 189 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 SERTAD4-AS1Q5TG53 156 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 RSBN1Q5VWQ0 802 aaPredicted RBP5.28□□□□□ -1.56
VCAN-207ENST00000507162 DEGS2Q6QHC5 323 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 PLEKHG7Q6ZR37 379 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 Q6ZRM9 215 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 KCTD20Q7Z5Y7 419 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 ELMOD2Q8IZ81 293 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 SLC38A6Q8IZM9 456 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 KIR2DL5AQ8N109 375 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 OR2T33Q8NG76 320 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 OR52M1Q8NGK5 317 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 OR5D18Q8NGL1 313 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 KIR2DL5BQ8NHK3 375 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 CT45A3Q8NHU0 189 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 CACNG8Q8WXS5 425 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 THRSPQ92748 146 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 FRZBQ92765 325 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 C7orf34Q96L11 122 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 APOL4Q9BPW4 351 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 RNF126Q9BV68 326 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 TMEM109Q9BVC6 243 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 C11orf68Q9H3H3 251 aaKnown RBP5.28□□□□□ -1.56
VCAN-207ENST00000507162 NCOR1P1Q9H4R4 102 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 ARMC1Q9NVT9 282 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 GID8Q9NWU2 228 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 MDFICQ9P1T7 246 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 GNG12Q9UBI6 72 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 BAIAP2Q9UQB8 552 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 V9GYQ6 96 aa5.28□□□□□ -1.56
VCAN-207ENST00000507162 TRAV24A0A0B4J272 114 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 MAGEB4O15481 346 aaPredicted RBP5.27□□□□□ -1.57
VCAN-207ENST00000507162 SYT7O43581 403 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 ZNF254O75437 659 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 KDM4BO94953 1096 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 SOX14O95416 240 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 GASTP01350 101 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 MRPL3P09001 348 aaKnown RBP5.27□□□□□ -1.57
VCAN-207ENST00000507162 OCM2P0CE71 109 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 OCMP0CE72 109 aaPredicted RBP5.27□□□□□ -1.57
VCAN-207ENST00000507162 CBLN1P23435 193 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 LIPEQ05469 1076 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 FXYD3Q14802 87 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 CDK5R1Q15078 307 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 MED22Q15528 200 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 RBPMS2Q6ZRY4 209 aaKnown RBP5.27□□□□□ -1.57
VCAN-207ENST00000507162 Q6ZTC4 211 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 RASSF6Q6ZTQ3 369 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 ZNF679Q8IYX0 411 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 C8orf31Q8N9H6 132 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 OR1L6Q8NGR2 347 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 OR5B3Q8NH48 314 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 NDUFAF3Q9BU61 184 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 ADI1Q9BV57 179 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 MRPL20Q9BYC9 149 aaKnown RBP5.27□□□□□ -1.57
VCAN-207ENST00000507162 CSTL1Q9H114 145 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 MAP6D1Q9H9H5 199 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 CMC2Q9NRP2 79 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 CMTM6Q9NX76 183 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 NKIRAS1Q9NYS0 192 aa5.27□□□□□ -1.57
VCAN-207ENST00000507162 ZNF320A2RRD8 509 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 DHRS7CA6NNS2 312 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 MPTX1A8MV57 137 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 PRR32B1ATL7 298 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 H3BUA1 57 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 RPP14O95059 124 aaKnown RBP5.26□□□□□ -1.57
VCAN-207ENST00000507162 CA2P00918 260 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 NPPAP01160 153 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 HLA-AP01891 365 aaKnown RBP5.26□□□□□ -1.57
VCAN-207ENST00000507162 SCTP09683 121 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 CPEP16870 476 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 PRKACBP22694 351 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 RRM2P31350 389 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 MAGEA2P43356 314 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 OR3A3P47888 321 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 LGALS7P47929 136 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms