RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 SSX6Q7RTT6 188 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC16A14Q7RTX9 510 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 VASH2Q86V25 355 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ELMOD2Q8IZ81 293 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM123Q8N131 208 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 Q8N402 240 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 C17orf78Q8N4C9 275 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC22A24Q8N4F4 322 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF433Q8N7K0 673 aaPredicted RBP1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF283Q8N7M2 679 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ZFP41Q8N8Y5 198 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ZIC4Q8N9L1 334 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 OR1F12Q8NHA8 337 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 RFESDQ8TAC1 157 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 PP6455Q8WZ26 134 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM106AQ96A25 262 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 DNAJA3Q96EY1 480 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 PGLYRP3Q96LB9 341 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 DERL3Q96Q80 235 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 S100A13Q99584 98 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 PDCD1LG2Q9BQ51 273 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 KLHDC3Q9BQ90 382 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 UQCC2Q9BRT2 126 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF416Q9BWM5 594 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 SRXN1Q9BYN0 137 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ACTR6Q9GZN1 396 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 PBOV1Q9GZY1 135 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC22A4Q9H015 551 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 DEFB127Q9H1M4 99 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 OPN3Q9H1Y3 402 aaPredicted RBP1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ABCB9Q9NP78 766 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 DIABLOQ9NR28 239 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC17A5Q9NRA2 495 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF275Q9NSD4 429 aaPredicted RBP1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM38BQ9NVV0 291 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 MRPL22Q9NWU5 206 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 COPZ2Q9P299 210 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 COMMD3Q9UBI1 195 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 NUFIP1Q9UHK0 495 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 COPS3Q9UNS2 423 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC22A13Q9Y226 551 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 PLEKHA6Q9Y2H5 1048 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 NOP16Q9Y3C1 178 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF292O60281 2723 aa1.84□□□□□ -2.12
TOPBP1-205ENST00000506779 NCOR2Q9Y618 2525 aa1.84□□□□□ -2.12
TOPBP1-205ENST00000506779 NUP210LQ5VU65 1888 aa1.84□□□□□ -2.12
TOPBP1-205ENST00000506779 TECTAO75443 2155 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 CEP192Q8TEP8 1941 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 SPAG17Q6Q759 2223 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 ZFHX2Q9C0A1 2572 aaPredicted RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 CACNA1BQ00975 2339 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 ANKRD12Q6UB98 2062 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 DOCK9Q9BZ29 2069 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 IGHV3-15A0A0B4J1V0 119 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 A0A0G2JMM0 328 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 TRBV7-9A0A0J9YWB2 115 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 LOC107986453A0A1B0GWG9 222 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 A0A1W2PPB8 328 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 A0A1W2PRS3 328 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 CIB4A0PJX0 185 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 PINLYPA6NC86 204 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 NAP1L6A6NFF2 107 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 VGLL3A8MV65 326 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 KIR3DP1A8MWS1 328 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 B4DXG7 233 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 F5H5K5 113 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 H0YL77 283 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 GABARAPH6UMI1 98 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 M0R135 149 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 SULT1C2O00338 296 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 RER1O15258 196 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 MAGEB4O15481 346 aaPredicted RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 HPGDSO60760 199 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 RAMP1O60894 148 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 PFDN1O60925 122 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 RBBP9O75884 186 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 DHRS3O75911 302 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 SNAPC5O75971 98 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 MPZL1O95297 269 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 CYB5AP00167 134 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 TGFAP01135 160 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 TTRP02766 147 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 MAS1P04201 325 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 ADRA2AP08913 450 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 P0C879 139 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 CD37P11049 281 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 IL7P13232 177 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 PGAM2P15259 253 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 ABOP16442 354 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF32P17041 273 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 CCL1P22362 96 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 PRKACBP22694 351 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 STOMP27105 288 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 HTR2CP28335 458 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 AGTR1P30556 359 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 OTX1P32242 354 aaPredicted RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 RCVRNP35243 200 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 OPRM1P35372 400 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 APLNRP35414 380 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 FAUP35544 74 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms