RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 ACTG1P63261 375 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 PAX2Q02962 417 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 LOXL1Q08397 574 aaPredicted RBP5.95□□□□□ -1.46
NUP54-204ENST00000506098 HMGN3Q15651 99 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 MAJINQ3KP22 176 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 Q5PR19 223 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 CD276Q5ZPR3 534 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 LYSMD2Q8IV50 215 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 GVQW1Q8N7I0 195 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 TMEM229BQ8NBD8 167 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 OR4K15Q8NH41 348 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 RNASE11Q8TAA1 199 aaKnown RBP5.95□□□□□ -1.46
NUP54-204ENST00000506098 SEC22CQ9BRL7 303 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 SSBP3Q9BWW4 388 aaPredicted RBP5.95□□□□□ -1.46
NUP54-204ENST00000506098 OR51M1Q9H341 326 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 LINC00574Q9H8X3 128 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 TAS2R8Q9NYW2 309 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 TAS2R3Q9NYW6 316 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 OR6C3Q9NZP0 311 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 CLN8Q9UBY8 286 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 UBE2J1Q9Y385 318 aaPredicted RBP5.95□□□□□ -1.46
NUP54-204ENST00000506098 LINC00312Q9Y6C7 94 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 IGKV1D-8A0A087WSZ0 117 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 MEIKINA0A087WXM9 373 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 PPIAL4CA0A0B4J2A2 164 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 KIR2DS1A0A191URI9 304 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 hADV38S2A0JD32 116 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 MEIS3P1A6NDR6 274 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 ZNF729A6NN14 1252 aaPredicted RBP5.94□□□□□ -1.46
NUP54-204ENST00000506098 TRDCB7Z8K6 153 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 NPIPB11E5RHQ5 1161 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 C15orf65H3BRN8 121 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 TXNL1O43396 289 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 CD74P04233 296 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 HEXAP06865 529 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 CSF1P09603 554 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 RCC1P18754 421 aaPredicted RBP5.94□□□□□ -1.46
NUP54-204ENST00000506098 TBPP20226 339 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 USF1P22415 310 aaPredicted RBP5.94□□□□□ -1.46
NUP54-204ENST00000506098 GDNFP39905 211 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 KIR2DS4P43632 304 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 DLX6P56179 175 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 EDDM3BP56851 147 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 RPL31P62899 125 aaKnown RBP5.94□□□□□ -1.46
NUP54-204ENST00000506098 HLA-DRB3P79483 266 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 IFITM3Q01628 133 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 DYRK1AQ13627 763 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 KLF9Q13886 244 aaPredicted RBP5.94□□□□□ -1.46
NUP54-204ENST00000506098 EDDM3AQ14507 147 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 KIR2DS1Q14954 304 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 TOR2AQ5JU69 321 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 DMRTA1Q5VZB9 504 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 TMEM200BQ69YZ2 307 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 TCF23Q7RTU1 214 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 TPRX1Q8N7U7 411 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 BEST4Q8NFU0 473 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 OR10A7Q8NGE5 316 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 OR5AP2Q8NGF4 316 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 OR4A4PQ8NGN8 299 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 OR13A1Q8NGR1 328 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 SNAPC3Q92966 411 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 CABLES2Q9BTV7 478 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 ST6GALNAC5Q9BVH7 336 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 TOLLIPQ9H0E2 274 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 ZNF286AQ9HBT8 521 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 CHMP1AQ9HD42 196 aaPredicted RBP5.94□□□□□ -1.46
NUP54-204ENST00000506098 RAB9BQ9NP90 201 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 ZNF230Q9UIE0 474 aaPredicted RBP5.94□□□□□ -1.46
NUP54-204ENST00000506098 ANXA10Q9UJ72 324 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 RPUSD1Q9UJJ7 312 aaKnown RBP5.94□□□□□ -1.46
NUP54-204ENST00000506098 TRAPPC2LQ9UL33 140 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 CSMD1Q96PZ7 3565 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 CREBBPQ92793 2442 aa5.94□□□□□ -1.46
NUP54-204ENST00000506098 FLNAP21333 2647 aaKnown RBP5.94□□□□□ -1.46
NUP54-204ENST00000506098 TET2Q6N021 2002 aaPredicted RBP5.93□□□□□ -1.46
NUP54-204ENST00000506098 LOC105371242A0A075B767 164 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 TRGV10A0A0A0MS01 117 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 KBTBD11-OT1A0A1B0GTJ5 212 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 C17orf98A8MV24 154 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 LEUTXA8MZ59 168 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 LINC00587B1AMM8 73 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 C22orf46C9J442 243 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 FAM157AC9JC47 383 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 C12orf77C9JDV5 145 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 F2RL2O00254 374 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 PLA2G10O15496 165 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 PHF1O43189 567 aaPredicted RBP5.93□□□□□ -1.46
NUP54-204ENST00000506098 FOXH1O75593 365 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 RBP4P02753 201 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 LIPFP07098 398 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 SCTP09683 121 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 CTXN2P0C2S0 81 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 PPIAL4GP0DN37 164 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 ZFP36P26651 326 aaKnown RBP5.93□□□□□ -1.46
NUP54-204ENST00000506098 IL2RGP31785 369 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 TAS2R46P59540 309 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 TAS2R19P59542 299 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 TAS2R60P59551 318 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 AP3S2P59780 193 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 HTD2P86397 168 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms