RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SERPINE3A8MV23 424 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 ZNF780AO75290 641 aaPredicted RBP10.31□□□□□ -0.76
DDX41-204ENST00000504807 CRTAPO75718 401 aaPredicted RBP10.31□□□□□ -0.76
DDX41-204ENST00000504807 PF4P02776 101 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 GAPDHP04406 335 aaKnown RBP10.31□□□□□ -0.76
DDX41-204ENST00000504807 CD1AP06126 327 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 GPR12P47775 334 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 THBS3P49746 956 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 ZNF137PP52743 207 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 UNC119Q13432 240 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 SLC35E3Q7Z769 313 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 STPG2Q8N412 459 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 STX19Q8N4C7 294 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 MUC7Q8TAX7 377 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 S100A13Q99584 98 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 SULT4A1Q9BR01 284 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 NICN1Q9BSH3 213 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 PARP12Q9H0J9 701 aaKnown RBP10.31□□□□□ -0.76
DDX41-204ENST00000504807 MBNL3Q9NUK0 354 aaKnown RBP10.31□□□□□ -0.76
DDX41-204ENST00000504807 TRAPPC2LQ9UL33 140 aa10.31□□□□□ -0.76
DDX41-204ENST00000504807 MCRIP1C9JLW8 97 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 MYL12BO14950 172 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 RPLP1P05386 114 aaKnown RBP10.3□□□□□ -0.76
DDX41-204ENST00000504807 CDK1P06493 297 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 CNTFRP26992 372 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 PPP1CCP36873 323 aaKnown RBP10.3□□□□□ -0.76
DDX41-204ENST00000504807 TAS2R43P59537 309 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 QRFPP83859 136 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 CFHR3Q02985 330 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 IRF3Q14653 427 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 DEFB136Q30KP8 78 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 ACSM3Q53FZ2 586 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 FAM71E2Q8N5Q1 922 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 P2RX4Q99571 388 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 TMED9Q9BVK6 235 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 ABCG5Q9H222 651 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 TAF9BQ9HBM6 251 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 C8orf4Q9NR00 106 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 CHCHD3Q9NX63 227 aaKnown RBP10.3□□□□□ -0.76
DDX41-204ENST00000504807 CKLFQ9UBR5 152 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 CSMD3Q7Z407 3707 aa10.3□□□□□ -0.76
DDX41-204ENST00000504807 NCBP2LA6PVI3 153 aaKnown RBP10.29□□□□□ -0.76
DDX41-204ENST00000504807 NHLRC4P0CG21 123 aaPredicted RBP10.29□□□□□ -0.76
DDX41-204ENST00000504807 CD37P11049 281 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 CHATP28329 748 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 HTR2CP28335 458 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 CD1BP29016 333 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 AQP4P55087 323 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 SLC35A2P78381 396 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 GABPB1Q06547 395 aaPredicted RBP10.29□□□□□ -0.76
DDX41-204ENST00000504807 EGFEM1PQ0D2K5 195 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 GPR176Q14439 515 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 MORN2Q502X0 79 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 C1orf100Q5SVJ3 147 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 TMEM91Q6ZNR0 172 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 TGIF2LXQ8IUE1 241 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 CDH26Q8IXH8 852 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 MRPS24Q96EL2 167 aaKnown RBP10.29□□□□□ -0.76
DDX41-204ENST00000504807 RAX2Q96IS3 184 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 S1PR3Q99500 378 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 FAAP24Q9BTP7 215 aa10.29□□□□□ -0.76
DDX41-204ENST00000504807 FAM90A10PA6NDY2 464 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 FAM90A7PA6NKC0 464 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 FAM90A23PA8MXZ1 464 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 PTGES3LE9PB15 166 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 H3BUI4 141 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 PDCD6O75340 191 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 FUT3P21217 361 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 OR3A3P47888 321 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 PLA2G7Q13093 441 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 LSAMPQ13449 338 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 MED21Q13503 144 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 GPR50Q13585 617 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 NKAPLQ5M9Q1 402 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 C6orf201Q7Z4U5 140 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 NKAIN3Q8N8D7 197 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 KLHL30-AS1Q8NEE0 82 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 OR2T10Q8NGZ9 312 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 CHPT1Q8WUD6 406 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 RCC1LQ96I51 464 aaKnown RBP10.28□□□□□ -0.76
DDX41-204ENST00000504807 HDHD3Q9BSH5 251 aaPredicted RBP10.28□□□□□ -0.76
DDX41-204ENST00000504807 MRPL20Q9BYC9 149 aaKnown RBP10.28□□□□□ -0.76
DDX41-204ENST00000504807 SPACA1Q9HBV2 294 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 LIN7CQ9NUP9 197 aaKnown RBP10.28□□□□□ -0.76
DDX41-204ENST00000504807 GNG12Q9UBI6 72 aa10.28□□□□□ -0.76
DDX41-204ENST00000504807 MOSP00540 346 aa10.27□□□□□ -0.77
DDX41-204ENST00000504807 SLC2A2P11168 524 aaPredicted RBP10.27□□□□□ -0.77
DDX41-204ENST00000504807 RPS25P62851 125 aaKnown RBP10.27□□□□□ -0.77
DDX41-204ENST00000504807 RPS27AP62979 156 aaKnown RBP10.27□□□□□ -0.77
DDX41-204ENST00000504807 HMGN3Q15651 99 aa10.27□□□□□ -0.77
DDX41-204ENST00000504807 Q3ZCU0 254 aa10.27□□□□□ -0.77
DDX41-204ENST00000504807 C6orf183Q5T699 404 aa10.27□□□□□ -0.77
DDX41-204ENST00000504807 RNLSQ5VYX0 342 aa10.27□□□□□ -0.77
DDX41-204ENST00000504807 TMEM203Q969S6 136 aa10.27□□□□□ -0.77
DDX41-204ENST00000504807 NABP2Q9BQ15 211 aa10.27□□□□□ -0.77
DDX41-204ENST00000504807 ZNF251Q9BRH9 671 aa10.27□□□□□ -0.77
DDX41-204ENST00000504807 UQCC2Q9BRT2 126 aa10.27□□□□□ -0.77
DDX41-204ENST00000504807 IFI27L2Q9H2X8 130 aa10.27□□□□□ -0.77
DDX41-204ENST00000504807 DCLRE1BQ9H816 532 aa10.27□□□□□ -0.77
DDX41-204ENST00000504807 OR2S2Q9NQN1 319 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms