RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 IZUMO4Q1ZYL8 232 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 MRGPRGQ86SM5 289 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 OR1A1Q9P1Q5 309 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 MGST3O14880 152 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 SYNGR2O43760 224 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 ASCL5Q7RTU5 278 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 FAM57AQ8TBR7 257 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 PKIBQ9C010 78 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 OR7C2O60412 319 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 SLC25A6P12236 298 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 KLRB1Q12918 225 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 OVCH2Q7RTZ1 564 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 RAB40CQ96S21 281 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 ATPIF1Q9UII2 106 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 HSF4Q9ULV5 492 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 TXNL1O43396 289 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 SLC38A11Q08AI6 406 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 ZNF787Q6DD87 383 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 MDS2Q8NDY4 140 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 OR11H4Q8NGC9 324 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 RPUSD4Q96CM3 377 aaKnown RBP12.04□□□□□ -0.48
TCOF1-207ENST00000504761 GNB4Q9HAV0 340 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 PLCE1Q9P212 2302 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 IGHV2OR16-5A0A0B4J2B6 119 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 F2RP25116 425 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 UBE2G2P60604 165 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 ANKRD55Q3KP44 614 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 PEAR1Q5VY43 1037 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-207ENST00000504761 ETV3LQ6ZN32 361 aa12.04□□□□□ -0.48
TCOF1-207ENST00000504761 SFTPCP11686 197 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 P2RY4P51582 365 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 VMA21Q3ZAQ7 101 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 MIDNQ504T8 468 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 NMES1Q9C002 83 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 UQCC1Q9NVA1 299 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 MED9Q9NWA0 146 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 CLLU1Q5K131 121 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 TMEM88Q6PEY1 159 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 LINC00596Q86U02 117 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 A0A0B4J293 547 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 TFF1P04155 84 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 COX5AP20674 150 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 TAGLN2P37802 199 aaKnown RBP12.03□□□□□ -0.48
TCOF1-207ENST00000504761 AKR1C3P42330 323 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 PAQR4Q8N4S7 273 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-207ENST00000504761 NANPQ8TBE9 248 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 PROK2Q9HC23 129 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 SSTR5P35346 364 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 GLRXP35754 106 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 RPL35P42766 123 aaKnown RBP12.03□□□□□ -0.48
TCOF1-207ENST00000504761 SSTP61278 116 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 UHRF2Q96PU4 802 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 SSX3Q99909 188 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 RHOFQ9HBH0 211 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 OR5AC2Q9NZP5 309 aa12.03□□□□□ -0.48
TCOF1-207ENST00000504761 ODAMA1E959 279 aa12.02□□□□□ -0.48
TCOF1-207ENST00000504761 TMEM11P17152 192 aa12.02□□□□□ -0.48
TCOF1-207ENST00000504761 CXCL2P19875 107 aa12.02□□□□□ -0.48
TCOF1-207ENST00000504761 OR4S2Q8NH73 311 aa12.02□□□□□ -0.48
TCOF1-207ENST00000504761 IGHV3-72A0A0B4J1Y9 119 aa12.02□□□□□ -0.49
TCOF1-207ENST00000504761 UMAD1C9J7I0 102 aa12.02□□□□□ -0.49
TCOF1-207ENST00000504761 CD40P25942 277 aa12.02□□□□□ -0.49
TCOF1-207ENST00000504761 DYNLT3P51808 116 aa12.02□□□□□ -0.49
TCOF1-207ENST00000504761 AANATQ16613 207 aa12.02□□□□□ -0.49
TCOF1-207ENST00000504761 OR4F5Q8NH21 305 aa12.02□□□□□ -0.49
TCOF1-207ENST00000504761 OR10C1Q96KK4 312 aa12.02□□□□□ -0.49
TCOF1-207ENST00000504761 OR4F4Q96R69 305 aa12.02□□□□□ -0.49
TCOF1-207ENST00000504761 A8MXE2 369 aa12.02□□□□□ -0.49
TCOF1-207ENST00000504761 ADH4P08319 380 aa12.02□□□□□ -0.49
TCOF1-207ENST00000504761 NRN1LQ496H8 165 aa12.02□□□□□ -0.49
TCOF1-207ENST00000504761 LFNGQ8NES3 379 aa12.02□□□□□ -0.49
TCOF1-207ENST00000504761 KCNIP2Q9NS61 270 aa12.02□□□□□ -0.49
TCOF1-207ENST00000504761 RCC2Q9P258 522 aaKnown RBP12.02□□□□□ -0.49
TCOF1-207ENST00000504761 IGKV3D-15A0A087WSY6 115 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 HNF1AP20823 631 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 HIST2H3PS2Q5TEC6 136 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 OR8B3Q8NGG8 313 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 SNRNP40Q96DI7 357 aaKnown RBP12.01□□□□□ -0.49
TCOF1-207ENST00000504761 CXorf58Q96LI9 332 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 OR8B2Q96RD0 313 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 ACTR3CQ9C0K3 210 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-207ENST00000504761 Q9N2K0 584 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 CDRT15L2A8MXV6 281 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 RAB13P51153 203 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 NHLH2Q02577 135 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 TGIF2LYQ8IUE0 185 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 TGIF2LXQ8IUE1 241 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 DCTN5Q9BTE1 182 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 RNF115Q9Y4L5 304 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 SLC25A4P12235 298 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 CRYGSP22914 178 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 BSPH1Q075Z2 132 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 CLEC12BQ2HXU8 276 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 KHDC1LQ5JSQ8 128 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 C1orf174Q8IYL3 243 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 SLC25A28Q96A46 364 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 PRR14LQ5THK1 2151 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 LAMA3Q16787 3333 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 IL18BPO95998 194 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 CD74P04233 296 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms