RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 GFRA2O00451 464 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 CDC42EP2O14613 210 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 MGST3O14880 152 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 NPFFO15130 113 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 TOMM40O96008 361 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 PTHLHP12272 177 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 PTGER1P34995 402 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 RAE1P78406 368 aaKnown RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 RING1Q06587 406 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 FAM159AQ6UWV7 190 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 C2CD4AQ8NCU7 369 aaPredicted RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 OR10J6PQ8NGY7 276 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 SLC25A40Q8TBP6 338 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 MBOAT4Q96T53 435 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 APOOQ9BUR5 198 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 GPR35Q9HC97 309 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 THSD7AQ9UPZ6 1657 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 SBF2Q86WG5 1849 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 NFASCO94856 1347 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 MUC21A0A0G2JKD1 596 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 MUC21A0A140T8X8 626 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 F6UB75 175 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 SFT2D2O95562 160 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 TBX6O95947 436 aaPredicted RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 HPNP05981 417 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 ORM2P19652 201 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 UBE2G1P62253 170 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 RPL38P63173 70 aaKnown RBP5.45□□□□□ -1.54
CLCN3-204ENST00000504131 VWC2Q2TAL6 325 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 MUC21Q5SSG8 566 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 TMEM25Q86YD3 366 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 MS4A6EQ96DS6 147 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 EHFQ9NZC4 300 aa5.45□□□□□ -1.54
CLCN3-204ENST00000504131 MYH1P12882 1939 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 TRAV18A0A075B6X5 111 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 H7C1H1 209 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 OR5AL1P0C617 328 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 IHHQ14623 411 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 TRMT12Q53H54 448 aaKnown RBP5.44□□□□□ -1.54
CLCN3-204ENST00000504131 LYSMD4Q5XG99 296 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 FBXL22Q6P050 247 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 MORN3Q6PF18 240 aaPredicted RBP5.44□□□□□ -1.54
CLCN3-204ENST00000504131 STAC2Q6ZMT1 411 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 CLEC14AQ86T13 490 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 MOB3BQ86TA1 216 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 SPACA5Q96QH8 159 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 MGST2Q99735 147 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 MYH2Q9UKX2 1941 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 ZNF561-AS1K7EIQ3 104 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 CRISP3P54108 245 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 METRNLQ641Q3 311 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 OOSP2Q86WS3 158 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 TMEM86AQ8N2M4 240 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 ZIC5Q96T25 663 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 MYH9P35579 1960 aaKnown RBP5.44□□□□□ -1.54
CLCN3-204ENST00000504131 HLA-DQA1Q5Y7H0 255 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 SFXN4Q6P4A7 337 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 PPP1R27Q86WC6 154 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 NEIL2Q969S2 332 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 MYADMQ96S97 322 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 ANKRD10Q9NXR5 420 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 TECRQ9NZ01 308 aaKnown RBP5.44□□□□□ -1.54
CLCN3-204ENST00000504131 TIMM10BQ9Y5J6 103 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 WNT11O96014 354 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 ATP1B1P05026 303 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 CBLN3Q6UW01 205 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 ARHGEF39Q8N4T4 335 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 TTC9CQ8N5M4 171 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 P2RY11Q96G91 374 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 LINC00477Q96M19 166 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 OR8B2Q96RD0 313 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 HAPLN2Q9GZV7 340 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 CISD1Q9NZ45 108 aaKnown RBP5.44□□□□□ -1.54
CLCN3-204ENST00000504131 CRIM1Q9NZV1 1036 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 PRO0628Q9UI54 55 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 A0A1B0GUL6 1792 aa5.44□□□□□ -1.54
CLCN3-204ENST00000504131 WDR81Q562E7 1941 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 TEX48A0A1B0GUV7 120 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 A1L4Q6 167 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 FAM90A27PA6NNH2 459 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 C17orf112F2Z3M2 114 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 FGF10O15520 208 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-204ENST00000504131 UBE2NP61088 152 aaKnown RBP5.43□□□□□ -1.54
CLCN3-204ENST00000504131 OR4X1Q8NH49 305 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 OR51H1Q8NH63 302 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 ABHD17AQ96GS6 310 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 TMUB1Q9BVT8 246 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 GPR84Q9NQS5 396 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 BAZ2BQ9UIF8 2168 aaKnown RBP5.43□□□□□ -1.54
CLCN3-204ENST00000504131 LAMB2P55268 1798 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 DDTLA6NHG4 134 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-204ENST00000504131 RRHO14718 337 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 GCM2O75603 506 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-204ENST00000504131 IL4P05112 153 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 EIF4EP06730 217 aaKnown RBP5.43□□□□□ -1.54
CLCN3-204ENST00000504131 VSIG10L2P0DP72 767 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 CCL5P13501 91 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 LINC00303Q3SY05 128 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 VAX1Q5SQQ9 334 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 ZC3H3Q8IXZ2 948 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms