RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 NRF1Q16656 503 aa3.02□□□□□ -1.93
SUB1-202ENST00000502453 SPATA31B1PQ5VZV4 182 aa3.02□□□□□ -1.93
SUB1-202ENST00000502453 DGAT2L6Q6ZPD8 337 aa3.02□□□□□ -1.93
SUB1-202ENST00000502453 FOXL2NBQ6ZUU3 175 aa3.02□□□□□ -1.93
SUB1-202ENST00000502453 SLC35E3Q7Z769 313 aa3.02□□□□□ -1.93
SUB1-202ENST00000502453 PACRGLQ8N7B6 248 aa3.02□□□□□ -1.93
SUB1-202ENST00000502453 ZNF114Q8NC26 417 aa3.02□□□□□ -1.93
SUB1-202ENST00000502453 FMC1Q96HJ9 113 aa3.02□□□□□ -1.93
SUB1-202ENST00000502453 PITX2Q99697 317 aa3.02□□□□□ -1.93
SUB1-202ENST00000502453 NKX6-2Q9C056 277 aaPredicted RBP3.02□□□□□ -1.93
SUB1-202ENST00000502453 SLC25A31Q9H0C2 315 aa3.02□□□□□ -1.93
SUB1-202ENST00000502453 OR51E2Q9H255 320 aa3.02□□□□□ -1.93
SUB1-202ENST00000502453 POMKQ9H5K3 350 aa3.02□□□□□ -1.93
SUB1-202ENST00000502453 CLTCL1P53675 1640 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 SBF1O95248 1867 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 TOPAZ1Q8N9V7 1692 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 ATG2AQ2TAZ0 1938 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 TRAV30A0A087WSZ9 112 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 SMIM35A0A1B0GVV1 85 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 SLC17A2O00624 439 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 MPC2O95563 127 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 PSG2P11465 335 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 WT1P19544 449 aaPredicted RBP3.01□□□□□ -1.93
SUB1-202ENST00000502453 PRTN3P24158 256 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 MYL9P24844 172 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 PIGPP57054 158 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 BTG2P78543 158 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 REG3AQ06141 175 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 FCN2Q15485 313 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 AVPI1Q5T686 147 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 ZNF343Q6P1L6 599 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 UGT2A3Q6UWM9 527 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 C1QL2Q7Z5L3 287 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 C11orf42Q8N5U0 333 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 EFCAB11Q9BUY7 163 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 MTFP1Q9UDX5 166 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 VSIG4Q9Y279 399 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 ZNF780BQ9Y6R6 833 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 ALS2Q96Q42 1657 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 CKAP5Q14008 2032 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 TRGV8A0A0C4DH27 118 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 SPAARA0A1B0GVQ0 90 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 PTHP01270 115 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 OR4A8P0C604 315 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 GNB3P16520 340 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 ZNF708P17019 499 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 RPL7P18124 248 aaKnown RBP3.01□□□□□ -1.93
SUB1-202ENST00000502453 RAB3BP20337 219 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 RPS3P23396 243 aaKnown RBP eCLIP3.01□□□□□ -1.932e-6■□□□□ 11.3
SUB1-202ENST00000502453 TFF2Q03403 129 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 PLP2Q04941 152 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 GINS1Q14691 196 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 OR8B8Q15620 311 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 MORN2Q502X0 79 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 LINC00299Q6ZSB3 139 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 Q6ZSR6 202 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 SSC4DQ8WTU2 575 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 F2RL3Q96RI0 385 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 RTBDNQ9BSG5 229 aaPredicted RBP3.01□□□□□ -1.93
SUB1-202ENST00000502453 LPAR5Q9H1C0 372 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 SRMSQ9H3Y6 488 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 SLCO1B3Q9NPD5 702 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 VAX2Q9UIW0 290 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 PEAK1Q9H792 1746 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 SBF2Q86WG5 1849 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 KIF13BQ9NQT8 1826 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 N4BP2Q86UW6 1770 aaPredicted RBP3.01□□□□□ -1.93
SUB1-202ENST00000502453 ADGRB3O60242 1522 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 ARID2Q68CP9 1835 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 SAA2-SAA4A0A096LPE2 208 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 A0A0G2JRQ6 117 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 IFITM10A6NMD0 228 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 RPL36A-HNRNPH2H7BZ11 118 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 RENP00797 406 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 APODP05090 189 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 SULT1A3P0DMM9 295 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 SULT1A4P0DMN0 295 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 CSRP1P21291 193 aaKnown RBP3.01□□□□□ -1.93
SUB1-202ENST00000502453 CHRNB4P30926 498 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 CCL23P55773 120 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 CDK6Q00534 326 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 RUNX3Q13761 415 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 TTC32Q5I0X7 151 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 C8orf82Q6P1X6 216 aaPredicted RBP3.01□□□□□ -1.93
SUB1-202ENST00000502453 OR51A2Q8NGJ7 313 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 GPR146Q96CH1 333 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 PRAC1Q96KF2 57 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 HS3ST2Q9Y278 367 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 BTRCQ9Y297 605 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 HDGFL3Q9Y3E1 203 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 CENPFP49454 3210 aa3.01□□□□□ -1.93
SUB1-202ENST00000502453 USP54Q70EL1 1684 aa3□□□□□ -1.93
SUB1-202ENST00000502453 IGLV5-37A0A075B6J1 123 aa3□□□□□ -1.93
SUB1-202ENST00000502453 FAM236DA0A1B0GTK5 79 aa3□□□□□ -1.93
SUB1-202ENST00000502453 IQCMA0A1B0GVH7 501 aa3□□□□□ -1.93
SUB1-202ENST00000502453 EEF1E1-BLOC1S5C9J1V9 151 aa3□□□□□ -1.93
SUB1-202ENST00000502453 EEF1E1O43324 174 aaKnown RBP3□□□□□ -1.93
SUB1-202ENST00000502453 CRYBA1P05813 215 aa3□□□□□ -1.93
SUB1-202ENST00000502453 IGHV4-38-2P0DP08 117 aa3□□□□□ -1.93
SUB1-202ENST00000502453 FAM236CP0DP71 79 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms