RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CMTM1Q8IZ96 169 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 SPEM1Q8N4L4 309 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 OR6M1Q8NGM8 313 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 RNF138Q8WVD3 245 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 DEDD2Q8WXF8 326 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 LRTOMTQ8WZ04 291 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 RAB37Q96AX2 223 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 CMBLQ96DG6 245 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 KCNS1Q96KK3 526 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 C20orf173Q96LM9 149 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 KCNS3Q9BQ31 491 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 CLSTN2Q9H4D0 955 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 ST6GALNAC4Q9H4F1 302 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 TSSC4Q9Y5U2 329 aaPredicted RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 ABCB11O95342 1321 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 FAM237AA0A1B0GTK4 181 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 FAM236AA0A1B0GUQ0 79 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 FAM236BA0A1B0GV22 79 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 C2orf92A0A1B0GVN3 265 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 A0A1W2PRQ8 180 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 HSPB2A8KAH6 182 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 A8MX80 341 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 H7C1H1 209 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 H7C2G1 150 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CDX4O14627 284 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 STK16O75716 305 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 HIST1H2ABP04908 130 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 IGHV1-8P0DP01 117 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SELLP14151 372 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 GABRB1P18505 474 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 PRTN3P24158 256 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MAT2AP31153 395 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 ARHGDIBP52566 201 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CTSCP53634 463 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 AQP4P55087 323 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 FAM3BP58499 235 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 TUBA1BP68363 451 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 IHHQ14623 411 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CNN3Q15417 329 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 HSPB2Q16082 182 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 C3orf36Q3SXR2 165 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 FAM159AQ6UWV7 190 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 FAM57BQ71RH2 274 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 TUBA1AQ71U36 451 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 HIST3H2AQ7L7L0 130 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 KTN1-AS1Q86SY8 53 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 DNAAF5Q86Y56 855 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ORMDL3Q8N138 153 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 LIX1Q8N485 282 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 UBL4BQ8N7F7 174 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 OR5D16Q8NGK9 328 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 NFKBIDQ8NI38 313 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 HIST1H2ACQ93077 130 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SPSB4Q96A44 273 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MCRIP2Q9BUT9 160 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 CALN1Q9BXU9 219 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MFFQ9GZY8 342 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 NIPAL2Q9H841 368 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 S100A14Q9HCY8 104 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ACOT13Q9NPJ3 140 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 C8orf4Q9NR00 106 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 RGS18Q9NS28 235 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 FBXO34Q9NWN3 711 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 IDI2-AS1Q9NZ38 188 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 NIP7Q9Y221 180 aaKnown RBP eCLIP1.14□□□□□ -2.23
XRN1-214ENST00000498077 ZNF443Q9Y2A4 671 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 AMMECR1Q9Y4X0 333 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 LRP4O75096 1905 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 RYR2Q92736 4967 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 BRCA2P51587 3418 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 TRBV5-4A0A0C4DH59 114 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 TRBV30A0A0K0K1B3 111 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MEIS3P1A6NDR6 274 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MBD3L3A6NE82 208 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 OR6C65A6NJZ3 312 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 H0YIG0 161 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 H3BNH8 94 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 K7EQZ3 153 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 M0QXV9 152 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 F2RL2O00254 374 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CLDN4O14493 209 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 OAS1P00973 400 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 CD7P09564 240 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 HOXC6P09630 235 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 EPCAMP16422 314 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 TNFRSF17Q02223 184 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 TMEM267Q0VDI3 215 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 HYAL4Q2M3T9 481 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MAJINQ3KP22 176 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 KIAA2026Q5HYC2 2103 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ZC2HC1BQ5TFG8 222 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 KDELC1Q6UW63 502 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 DPY19L2P2Q6ZN68 376 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SYCE1Q8N0S2 351 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 NHLRC2Q8NBF2 726 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 OR8K3Q8NH51 312 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 AKR7LQ8NHP1 331 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MUC7Q8TAX7 377 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ITFG2Q969R8 447 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 FLYWCH2Q96CP2 140 aaKnown RBP1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms