RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 NKX2-6A6NCS4 301 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 C9J4A7 227 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 F5H5K5 113 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 LYNX1G3V0Z9 82 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 FCN1O00602 326 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 TOX3O15405 576 aaPredicted RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 GMDSO60547 372 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 EIF4E2O60573 245 aaKnown RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 LYZL6O75951 148 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 LY6HO94772 140 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 GLSO94925 669 aaPredicted RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 GABARAPO95166 117 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 AHSA1O95433 338 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 SIX6O95475 246 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 IFNA14P01570 189 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 TTRP02766 147 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 GP1BAP07359 652 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 UCHL1P09936 223 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 PGA4P0DJD7 388 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 PGA3P0DJD8 388 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 LYNX1P0DP58 116 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 HPGDP15428 266 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 NPR2P20594 1047 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 CCNOP22674 350 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 CALCRP30988 508 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 MPV17P39210 176 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 PMELP40967 661 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 PTGFRP43088 359 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 GDI2P50395 445 aaKnown RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 CCR6P51684 374 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 CARD18P57730 90 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 ZNF121P58317 390 aaPredicted RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 GABARAPL2P60520 117 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 ESRRGP62508 458 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 ARG2P78540 354 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 H3F3AP84243 136 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 PSG4Q00888 419 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 HSF2Q03933 536 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 RIPPLY1Q0D2K3 151 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 CDC20Q12834 499 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 DAZ2Q13117 558 aaKnown RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 TPBGQ13641 420 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 GNA13Q14344 377 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 LAGE3Q14657 143 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 PON3Q15166 354 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 ZNHIT3Q15649 155 aaPredicted RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 GLYATL3Q5SZD4 288 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 HBMQ6B0K9 141 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 TMEM225Q6GV28 225 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 FAHD2BQ6P2I3 314 aaPredicted RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 CNIH2Q6PI25 160 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 IGFL3Q6UXB1 125 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 RTL4Q6ZR62 310 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 AAED1Q7RTV5 226 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 GRINAQ7Z429 371 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 FAM220AQ7Z4H9 259 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 WDR86Q86TI4 376 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 ANGPTL5Q86XS5 388 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 LYPD6Q86Y78 171 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 TMEM123Q8N131 208 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 NATD1Q8N6N6 113 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 ZNF433Q8N7K0 673 aaPredicted RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 C15orf54Q8N8G6 183 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 WDR31Q8NA23 367 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 TMEM104Q8NE00 496 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 PROKR2Q8NFJ6 384 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 OR9K2Q8NGE7 335 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 OR51D1Q8NGF3 324 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 OR8B12Q8NGG6 310 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 OR4D6Q8NGJ1 314 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 OR8J1Q8NGP2 316 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 OR2G2Q8NGZ5 317 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 OR2T4Q8NH00 348 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 MCFD2Q8NI22 146 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 LINC01560Q8TB33 94 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 TRMT10AQ8TBZ6 339 aaKnown RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 DNAJA4Q8WW22 397 aaPredicted RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 MYDGFQ969H8 173 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 SLAMF6Q96DU3 332 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 FAHD2AQ96GK7 314 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 OXGR1Q96P68 337 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 OR8B4Q96RC9 309 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 TSC22D3Q99576 134 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 TMEM43Q9BTV4 400 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 RNF126Q9BV68 326 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 DDA1Q9BW61 102 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 SLC25A39Q9BZJ4 359 aaPredicted RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 NXF2Q9GZY0 626 aaKnown RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 TXNIPQ9H3M7 391 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 WDR54Q9H977 334 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 SIAEQ9HAT2 523 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 NGBQ9NPG2 151 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 ZNF331Q9NQX6 463 aaPredicted RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 DAZ3Q9NR90 486 aaKnown RBP1.82□□□□□ -2.12
RIF1-212ENST00000498041 RHBDL2Q9NX52 303 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 SCN3BQ9NY72 215 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 PTTG3PQ9NZH4 202 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 ZNRD1Q9P1U0 126 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 OR5V1Q9UGF6 321 aa1.82□□□□□ -2.12
RIF1-212ENST00000498041 NUFIP1Q9UHK0 495 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms