RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CDK14O94921 469 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 IGHV3-30-3P0DP02 117 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 CTSEP14091 401 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 NQO1P15559 274 aaKnown RBP0.73□□□□□ -2.29
SMC4-227ENST00000497984 AKR1C4P17516 323 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 PSMA1P25786 263 aaKnown RBP0.73□□□□□ -2.29
SMC4-227ENST00000497984 UGT2B10P36537 528 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 NUP62P37198 522 aaPredicted RBP0.73□□□□□ -2.29
SMC4-227ENST00000497984 LPAR6P43657 344 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 EMP2P54851 167 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 RWDD2BP57060 319 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 GABARAPL2P60520 117 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 TNNC1P63316 161 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 BSXQ3C1V8 233 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 MRPL51Q4U2R6 128 aaKnown RBP0.73□□□□□ -2.29
SMC4-227ENST00000497984 OR10J3Q5JRS4 329 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 ST13P4Q8IZP2 240 aaPredicted RBP0.73□□□□□ -2.29
SMC4-227ENST00000497984 GALMQ96C23 342 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 MRAP2Q96G30 205 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 METTL8Q9H825 291 aaKnown RBP0.73□□□□□ -2.29
SMC4-227ENST00000497984 MRM2Q9UI43 246 aaKnown RBP0.73□□□□□ -2.29
SMC4-227ENST00000497984 SCML1Q9UN30 329 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 POFUT2Q9Y2G5 429 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 ATG2BQ96BY7 2078 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 RTEL1-TNFRSF6BF6WH68 1400 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 ABCB11O95342 1321 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 A0A1B0GX12 115 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 BOLA2-SMG1P6H3BVE0 249 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 NDUFS8O00217 210 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 GPR171O14626 319 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 CRXO43186 299 aaPredicted RBP0.72□□□□□ -2.29
SMC4-227ENST00000497984 LY6HO94772 140 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 CST4P01036 141 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 LYNX1P0DP58 116 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 CCL2P13500 99 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 LCN1P31025 176 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 PAFAH1B3Q15102 231 aaKnown RBP0.72□□□□□ -2.29
SMC4-227ENST00000497984 PSG3Q16557 428 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 HENMT1Q5T8I9 393 aaKnown RBP0.72□□□□□ -2.29
SMC4-227ENST00000497984 Q6ZRN7 208 aaPredicted RBP0.72□□□□□ -2.29
SMC4-227ENST00000497984 MRPL52Q86TS9 123 aaKnown RBP0.72□□□□□ -2.29
SMC4-227ENST00000497984 LRRC20Q8TCA0 184 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 EBNA1BP2Q99848 306 aaKnown RBP0.72□□□□□ -2.29
SMC4-227ENST00000497984 HSPB9Q9BQS6 159 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 NAA38Q9BRA0 125 aaKnown RBP0.72□□□□□ -2.29
SMC4-227ENST00000497984 ZNF426Q9BUY5 554 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 GOLPH3Q9H4A6 298 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 XKR8Q9H6D3 395 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 TXNL4BQ9NX01 149 aaKnown RBP0.72□□□□□ -2.29
SMC4-227ENST00000497984 ENPP5Q9UJA9 477 aa0.72□□□□□ -2.29
SMC4-227ENST00000497984 TRPM3Q9HCF6 1732 aaPredicted RBP0.72□□□□□ -2.29
SMC4-227ENST00000497984 USP42Q9H9J4 1324 aaKnown RBP0.71□□□□□ -2.3
SMC4-227ENST00000497984 ADAMTSL1Q8N6G6 1762 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 GOLGA8IPA6NC78 632 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 CD36P16671 472 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 PPP1CCP36873 323 aaKnown RBP0.71□□□□□ -2.3
SMC4-227ENST00000497984 AKR1C2P52895 323 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 TIMM23BQ5SRD1 257 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 FAM201AQ5SY85 155 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 LRRC6Q86X45 466 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 DOLPP1Q86YN1 238 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 ZBTB8OSQ8IWT0 167 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 C10orf126Q8N4M7 172 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 OR11H1Q8NG94 326 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 C16orf78Q8WTQ4 265 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 TMEM239Q8WW34 195 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 IFT81Q8WYA0 676 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 MBOAT7Q96N66 472 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 TBX5Q99593 518 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 GPR22Q99680 433 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 ZNF471Q9BX82 626 aaPredicted RBP0.71□□□□□ -2.3
SMC4-227ENST00000497984 PECRQ9BY49 303 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 MRPL32Q9BYC8 188 aaKnown RBP0.71□□□□□ -2.3
SMC4-227ENST00000497984 GTSF1LQ9H1H1 148 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 C11orf1Q9H5F2 150 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 DMAC2Q9NW81 257 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 MRPS16Q9Y3D3 137 aaKnown RBP0.71□□□□□ -2.3
SMC4-227ENST00000497984 RGS12O14924 1447 aa0.71□□□□□ -2.3
SMC4-227ENST00000497984 AK9Q5TCS8 1911 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 TRGV2A0A075B6R0 118 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 IGHV3-73A0A0B4J1V6 119 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 C9J4A7 227 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 H3BSA7 217 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 SGCEO43556 437 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 LDOC1O95751 146 aaPredicted RBP0.7□□□□□ -2.3
SMC4-227ENST00000497984 FBP1P09467 338 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 CCDC172P0C7W6 258 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 ESDP10768 282 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 ALOX5APP20292 161 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 CD200P41217 278 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 ACTR1BP42025 376 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 SULT1A2P50226 295 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 SLC35A2P78381 396 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 RAB31Q13636 194 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 FLOT2Q14254 428 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 PDK2Q15119 407 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 MAPK14Q16539 360 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 CENPWQ5EE01 88 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 XKRXQ6PP77 449 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 RASL11AQ6T310 242 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms