RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 SPATA45Q537H7 98 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 OR5AU1Q8NGC0 362 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 FAM131CQ96AQ9 280 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 KLRF1Q9NZS2 232 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 TRAV1-1A0A0B4J248 108 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 IGKV1D-13A0A0B4J2D9 117 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 C1QTNF9P0C862 333 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 IGKV1-13P0DP09 117 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 MPLP40238 635 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 THBS3P49746 956 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 AARDQ4LEZ3 155 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 TPTE2P1Q5T6R2 138 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 C7orf61Q8IZ16 206 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 CACNG5Q9UF02 275 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 F2Z2F3 143 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 TNFP01375 233 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 RANP62826 216 aaKnown RBP11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 ID3Q02535 119 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 SSPNQ14714 243 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 SNAI3Q3KNW1 292 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 FFAR4Q5NUL3 377 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 ZNF721Q8TF20 911 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 OR4C12Q96R67 309 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 C20orf144Q9BQM9 153 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 GAL3ST2Q9H3Q3 398 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 RBM7Q9Y580 266 aaKnown RBP11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 M0R135 149 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 ZNHIT1O43257 154 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 SCTP09683 121 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 CRISP2P16562 243 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 MSMO1Q15800 293 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 ST6GALNAC3Q8NDV1 305 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 ZNF799Q96GE5 643 aa11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 ALKBH3Q96Q83 286 aaPredicted RBP11.22□□□□□ -0.61
GAPVD1-220ENST00000497580 TSPAN2O60636 221 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 IGKV1D-33P01593 117 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 IGKV1-33P01594 117 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 GRB2P62993 217 aaKnown RBP11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 ZDHHC23Q8IYP9 409 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 RPP25LQ8N5L8 163 aaKnown RBP11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 UBALD1Q8TB05 177 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 PP6455Q8WZ26 134 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 ANAPC16Q96DE5 110 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 STARD4Q96DR4 205 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 WNT10AQ9GZT5 417 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 TAAR3PQ9P1P4 343 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 CD300LBA8K4G0 201 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 ZNF814B7Z6K7 855 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 DIRC3C9JPN6 131 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 EFNA3P52797 238 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 VAMP3Q15836 100 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 WDR5BQ86VZ2 330 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 OSR2Q8N2R0 312 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 GPR146Q96CH1 333 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 WDYHV1Q96HA8 205 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 MRGPRX1Q96LB2 322 aa11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 PNRC2Q9NPJ4 139 aaKnown RBP11.21□□□□□ -0.61
GAPVD1-220ENST00000497580 SVILO95425 2214 aa11.21□□□□□ -0.62
GAPVD1-220ENST00000497580 LIPT2A6NK58 231 aa11.21□□□□□ -0.62
GAPVD1-220ENST00000497580 TDGF1P13385 188 aa11.21□□□□□ -0.62
GAPVD1-220ENST00000497580 SSC4DQ8WTU2 575 aa11.21□□□□□ -0.62
GAPVD1-220ENST00000497580 IL1F10Q8WWZ1 152 aa11.21□□□□□ -0.62
GAPVD1-220ENST00000497580 OIT3Q8WWZ8 545 aa11.21□□□□□ -0.62
GAPVD1-220ENST00000497580 GABRG3Q99928 467 aa11.21□□□□□ -0.62
GAPVD1-220ENST00000497580 PARD6GQ9BYG4 376 aaPredicted RBP11.21□□□□□ -0.62
GAPVD1-220ENST00000497580 KNTC1P50748 2209 aa11.21□□□□□ -0.62
GAPVD1-220ENST00000497580 IGKV1-27A0A075B6S5 117 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 ARF1P84077 181 aaKnown RBP11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 DEFB133Q30KQ1 61 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 SP5Q6BEB4 398 aaPredicted RBP11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 LYG1Q8N1E2 194 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 SIGLECL1Q8N7X8 197 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 LMX1AQ8TE12 382 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 MBD3L1Q8WWY6 194 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 PSMF1Q92530 271 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 PIGCQ92535 297 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 SGCZQ96LD1 299 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 DERL1Q9BUN8 251 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 GTF3C1Q12789 2109 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 SH2D1BO14796 132 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 NDUFB8O95169 186 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 TCN2P20062 427 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 WIPI2Q9Y4P8 454 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 IGHV3-15A0A0B4J1V0 119 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 KIAA1324LA8MWY0 1029 aaPredicted RBP11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 CLDN1O95832 211 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 SRP14P37108 136 aaKnown RBP11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 NMSQ5H8A3 153 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 ZNF525Q8N782 197 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 ALKBH4Q9NXW9 302 aa11.2□□□□□ -0.62
GAPVD1-220ENST00000497580 IGKV1-12A0A0C4DH73 117 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 NXPH2O95156 264 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 IGKV1D-12P01611 117 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 PATE4P0C8F1 98 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 PSG2P11465 335 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 SELENOTP62341 195 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 HBG1P69891 147 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 HBG2P69892 147 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms