RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 BANF2Q9H503 90 aa13.48□□□□□ -0.25
SMC4-226ENST00000497311 ZMAT5Q9UDW3 170 aaKnown RBP13.48□□□□□ -0.25
SMC4-226ENST00000497311 FAM90A10PA6NDY2 464 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 FAM90A7PA6NKC0 464 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 FAM90A23PA8MXZ1 464 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 ZNF736B4DX44 427 aaPredicted RBP13.47□□□□□ -0.25
SMC4-226ENST00000497311 CCL24O00175 119 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 CA11O75493 328 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 CRTAPO75718 401 aaPredicted RBP13.47□□□□□ -0.25
SMC4-226ENST00000497311 MGMTP16455 207 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 ZNF134P52741 427 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 RAB25P57735 213 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 CD69Q07108 199 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 CT45A1Q5HYN5 189 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 STEAP3Q658P3 488 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 AHSA2Q719I0 299 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 OR1L1Q8NH94 360 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 CT45A3Q8NHU0 189 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 RAX2Q96IS3 184 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 DUX3Q96PT4 197 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 FKBP14Q9NWM8 211 aa13.47□□□□□ -0.25
SMC4-226ENST00000497311 GLAP06280 429 aa13.46□□□□□ -0.25
SMC4-226ENST00000497311 ELANEP08246 267 aa13.46□□□□□ -0.25
SMC4-226ENST00000497311 RCC1P18754 421 aaPredicted RBP13.46□□□□□ -0.25
SMC4-226ENST00000497311 FUT3P21217 361 aa13.46□□□□□ -0.25
SMC4-226ENST00000497311 SOX6P35712 828 aa13.46□□□□□ -0.25
SMC4-226ENST00000497311 GP2P55259 537 aaKnown RBP13.46□□□□□ -0.25
SMC4-226ENST00000497311 FOXE3Q13461 319 aa13.46□□□□□ -0.25
SMC4-226ENST00000497311 DCTN2Q13561 401 aaKnown RBP13.46□□□□□ -0.25
SMC4-226ENST00000497311 DOC2BQ14184 412 aa13.46□□□□□ -0.25
SMC4-226ENST00000497311 C6orf141Q5SZD1 244 aa13.46□□□□□ -0.25
SMC4-226ENST00000497311 C11orf87Q6NUJ2 197 aa13.46□□□□□ -0.25
SMC4-226ENST00000497311 FAM71E2Q8N5Q1 922 aa13.46□□□□□ -0.25
SMC4-226ENST00000497311 OR8U1Q8NH10 309 aa13.46□□□□□ -0.25
SMC4-226ENST00000497311 DERL3Q96Q80 235 aa13.46□□□□□ -0.25
SMC4-226ENST00000497311 COL7A1Q02388 2944 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 UBE2QL1A1L167 161 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 MYL12BO14950 172 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 SC5DO75845 299 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 CD1AP06126 327 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 CELP19835 753 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 VDAC1P21796 283 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 VHLP40337 213 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 CDX1P47902 265 aaPredicted RBP13.45□□□□□ -0.26
SMC4-226ENST00000497311 F2RL1P55085 397 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 DGCR2P98153 550 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 KIR2DS1Q14954 304 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 LCNL1Q6ZST4 164 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 LYPD6Q86Y78 171 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 NKAIN3Q8N8D7 197 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 RNF152Q8N8N0 203 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 THRSPQ92748 146 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 Q96M66 194 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 B9D2Q9BPU9 175 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 HSPB9Q9BQS6 159 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 TAF9BQ9HBM6 251 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 OR2S2Q9NQN1 319 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 KCNIP1Q9NZI2 227 aa13.45□□□□□ -0.26
SMC4-226ENST00000497311 LANCL1O43813 399 aa13.44□□□□□ -0.26
SMC4-226ENST00000497311 MYF6P23409 242 aa13.44□□□□□ -0.26
SMC4-226ENST00000497311 MAPK3P27361 379 aaPredicted RBP13.44□□□□□ -0.26
SMC4-226ENST00000497311 WNT4P56705 351 aa13.44□□□□□ -0.26
SMC4-226ENST00000497311 DEFB136Q30KP8 78 aa13.44□□□□□ -0.26
SMC4-226ENST00000497311 MORN2Q502X0 79 aa13.44□□□□□ -0.26
SMC4-226ENST00000497311 SIGIRRQ6IA17 410 aa13.44□□□□□ -0.26
SMC4-226ENST00000497311 ZNF554Q86TJ5 538 aa13.44□□□□□ -0.26
SMC4-226ENST00000497311 OR5M8Q8NGP6 311 aa13.44□□□□□ -0.26
SMC4-226ENST00000497311 RBMXL1Q96E39 390 aaKnown RBP13.44□□□□□ -0.26
SMC4-226ENST00000497311 UQCC2Q9BRT2 126 aa13.44□□□□□ -0.26
SMC4-226ENST00000497311 ANKRD60Q9BZ19 345 aa13.44□□□□□ -0.26
SMC4-226ENST00000497311 MBNL3Q9NUK0 354 aaKnown RBP13.44□□□□□ -0.26
SMC4-226ENST00000497311 GHRLQ9UBU3 117 aa13.44□□□□□ -0.26
SMC4-226ENST00000497311 RAMP3O60896 148 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 PDCD6O75340 191 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 ATP6V1G2O95670 118 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 IGHG4P01861 327 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 IGF1P05019 195 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 CDK1P06493 297 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 HSPA13P48723 471 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 CFHR3Q02985 330 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 LSAMPQ13449 338 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 MMDQ15546 238 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 RNLSQ5VYX0 342 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 IZUMO2Q6UXV1 221 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 NANOGP1Q8N7R0 232 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 OR52L2PQ8NGH6 319 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 FAM46BQ96A09 425 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 ABHD14AQ9BUJ0 271 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMC4-226ENST00000497311 SCN3BQ9NY72 215 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 ZNF107Q9UII5 783 aaPredicted RBP13.43□□□□□ -0.26
SMC4-226ENST00000497311 ERGIC3Q9Y282 383 aa13.43□□□□□ -0.26
SMC4-226ENST00000497311 PTGES3LE9PB15 166 aa13.42□□□□□ -0.26
SMC4-226ENST00000497311 OR5H8P0DN80 308 aa13.42□□□□□ -0.26
SMC4-226ENST00000497311 SLC2A2P11168 524 aaPredicted RBP13.42□□□□□ -0.26
SMC4-226ENST00000497311 MRPL30Q8TCC3 161 aaKnown RBP13.42□□□□□ -0.26
SMC4-226ENST00000497311 KCTD7Q96MP8 289 aa13.42□□□□□ -0.26
SMC4-226ENST00000497311 CHCHD6Q9BRQ6 235 aa13.42□□□□□ -0.26
SMC4-226ENST00000497311 CST11Q9H112 138 aa13.42□□□□□ -0.26
SMC4-226ENST00000497311 ZNF580Q9UK33 172 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms