RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 SEC16AO15027 2179 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 IGKV3D-11A0A0A0MRZ8 115 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 OR11H12B2RN74 326 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 F5H5T6 163 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 F5H768 121 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 CXCR6O00574 342 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 BHLHE40O14503 412 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 KLRC4O43908 158 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 MPZL2O60487 215 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 SHOX2O60902 331 aaPredicted RBP2.32□□□□□ -2.04
VPS36-206ENST00000497149 TYMSP04818 313 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 OR5AL1P0C617 328 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 OR4Q2P0C623 313 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 HIST1H1EP10412 219 aaKnown RBP2.32□□□□□ -2.04
VPS36-206ENST00000497149 SCGB1A1P11684 91 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 IFI30P13284 250 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 RPL5P46777 297 aaKnown RBP2.32□□□□□ -2.04
VPS36-206ENST00000497149 TTPAP49638 278 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 PSMB2P49721 201 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 SULT1A1P50225 295 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 SULT1A2P50226 295 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 AP1S1P61966 158 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 RPL31P62899 125 aaKnown RBP2.32□□□□□ -2.04
VPS36-206ENST00000497149 ATP5G2Q06055 141 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 MEF2CQ06413 473 aaPredicted RBP2.32□□□□□ -2.04
VPS36-206ENST00000497149 TRAM1Q15629 374 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 TBC1D28Q2M2D7 210 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 DEFB115Q30KQ5 88 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 OR10J3Q5JRS4 329 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 ZFAND6Q6FIF0 208 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 SLC36A1Q7Z2H8 476 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 LYG2Q86SG7 212 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 CA13Q8N1Q1 262 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 NATD1Q8N6N6 113 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 OR11H1Q8NG94 326 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 OR11H2Q8NH07 326 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 FAM57AQ8TBR7 257 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 C12orf43Q96C57 262 aaKnown RBP2.32□□□□□ -2.04
VPS36-206ENST00000497149 ADTRPQ96IZ2 230 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 GPR22Q99680 433 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 DHRS9Q9BPW9 319 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 CDCA4Q9BXL8 241 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 UGT2B28Q9BY64 529 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 FAM206AQ9NX38 181 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 VPS29Q9UBQ0 182 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 LSM5Q9Y4Y9 91 aaKnown RBP2.32□□□□□ -2.04
VPS36-206ENST00000497149 HSPB11Q9Y547 144 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 ORC6Q9Y5N6 252 aa2.32□□□□□ -2.04
VPS36-206ENST00000497149 SETD1AO15047 1707 aaKnown RBP2.31□□□□□ -2.04
VPS36-206ENST00000497149 FAM240AA0A1B0GVK7 77 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 IZUMO1RA6ND01 250 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 C21orf140B9A014 251 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 CDIPTO14735 213 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 AZIN1O14977 448 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 UBDO15205 165 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 UGT2B11O75310 529 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 NRASP01111 189 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 HRASP01112 189 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 KRASP01116 189 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 OR5AC1P0C628 307 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 P0C880 135 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 ALOX5APP20292 161 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 RPS12P25398 132 aaKnown RBP2.31□□□□□ -2.04
VPS36-206ENST00000497149 CRYBA4P53673 196 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 DLX6P56179 175 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 OR12D2P58182 307 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 RANP62826 216 aaKnown RBP2.31□□□□□ -2.04
VPS36-206ENST00000497149 BTN3A2P78410 334 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 CD164Q04900 197 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 LAMTOR4Q0VGL1 99 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 BAMBIQ13145 260 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 EDDM3AQ14507 147 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 TSNQ15631 228 aaKnown RBP2.31□□□□□ -2.04
VPS36-206ENST00000497149 TRIP13Q15645 432 aaPredicted RBP2.31□□□□□ -2.04
VPS36-206ENST00000497149 HIST3H3Q16695 136 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 ARHGAP11BQ3KRB8 267 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 CDNFQ49AH0 187 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 HIST2H3PS2Q5TEC6 136 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 CST9Q5W186 159 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 DHRS4L2Q6PKH6 230 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 IDO2Q6ZQW0 420 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 DHFR2Q86XF0 187 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 C10orf107Q8IVU9 208 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 CPNE9Q8IYJ1 553 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 TMEM161BQ8NDZ6 487 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 OR10X1Q8NGY0 326 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 ANKRD36BP1Q96IX9 119 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 C20orf144Q9BQM9 153 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 TMEM208Q9BTX3 173 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 CCDC90BQ9GZT6 254 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 NXF2Q9GZY0 626 aaKnown RBP2.31□□□□□ -2.04
VPS36-206ENST00000497149 TLNRD1Q9H1K6 362 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 MAP1LC3AQ9H492 121 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 NMNAT1Q9HAN9 279 aaPredicted RBP2.31□□□□□ -2.04
VPS36-206ENST00000497149 ACOT13Q9NPJ3 140 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 INIPQ9NRY2 104 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 GLTPQ9NZD2 209 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 COMMD9Q9P000 198 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 HHLA2Q9UM44 414 aa2.31□□□□□ -2.04
VPS36-206ENST00000497149 SLC7A11Q9UPY5 501 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms