RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 CRTAPO75718 401 aaPredicted RBP11.93□□□□□ -0.5
NEK4-206ENST00000496822 PF4P02776 101 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 RCC1P18754 421 aaPredicted RBP11.93□□□□□ -0.5
NEK4-206ENST00000496822 GALP22466 123 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 EBI3Q14213 229 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 FOXB2Q5VYV0 432 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 C5orf24Q7Z6I8 188 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 IZUMO1Q8IYV9 350 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 GAPTQ8N292 157 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 PRR18Q8N4B5 295 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 Q8N6K4 173 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 C8orf31Q8N9H6 132 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 ZNF439Q8NDP4 499 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 OR10V1Q8NGI7 309 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 OR1L1Q8NH94 360 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 RTN4IP1Q8WWV3 396 aaPredicted RBP11.93□□□□□ -0.5
NEK4-206ENST00000496822 ST6GALNAC6Q969X2 333 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 FAM46BQ96A09 425 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 EAF1Q96JC9 268 aaPredicted RBP11.93□□□□□ -0.5
NEK4-206ENST00000496822 TMED9Q9BVK6 235 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 TRAPPC2LQ9UL33 140 aa11.93□□□□□ -0.5
NEK4-206ENST00000496822 UBE2QL1A1L167 161 aa11.92□□□□□ -0.5
NEK4-206ENST00000496822 LINC01548A6NM66 108 aa11.92□□□□□ -0.5
NEK4-206ENST00000496822 ZNF736B4DX44 427 aaPredicted RBP11.92□□□□□ -0.5
NEK4-206ENST00000496822 HBZP02008 142 aa11.92□□□□□ -0.5
NEK4-206ENST00000496822 GAPDHP04406 335 aaKnown RBP11.92□□□□□ -0.5
NEK4-206ENST00000496822 CD36P16671 472 aa11.92□□□□□ -0.5
NEK4-206ENST00000496822 ETV3LQ6ZN32 361 aa11.92□□□□□ -0.5
NEK4-206ENST00000496822 C18orf65Q6ZTR6 163 aa11.92□□□□□ -0.5
NEK4-206ENST00000496822 CDH26Q8IXH8 852 aa11.92□□□□□ -0.5
NEK4-206ENST00000496822 NKAIN3Q8N8D7 197 aa11.92□□□□□ -0.5
NEK4-206ENST00000496822 PHYHIPQ92561 330 aa11.92□□□□□ -0.5
NEK4-206ENST00000496822 NECAP2Q9NVZ3 263 aa11.92□□□□□ -0.5
NEK4-206ENST00000496822 SSR3Q9UNL2 185 aa11.92□□□□□ -0.5
NEK4-206ENST00000496822 FAM90A10PA6NDY2 464 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 FAM90A7PA6NKC0 464 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 SERPINE3A8MV23 424 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 FAM90A23PA8MXZ1 464 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 SC5DO75845 299 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 ARL6IP5O75915 188 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 TFAP2AP05549 437 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 ALDH3B2P48448 385 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 ZNF134P52741 427 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 GNMTQ14749 295 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 SSX1Q16384 188 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 CT45A1Q5HYN5 189 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 SLC25A48Q6ZT89 311 aaKnown RBP11.91□□□□□ -0.5
NEK4-206ENST00000496822 REC114Q7Z4M0 266 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 SLC35E3Q7Z769 313 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 OR13F1Q8NGS4 319 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 CT45A3Q8NHU0 189 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 MRAPQ8TCY5 172 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 UQCC2Q9BRT2 126 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 KCNK15Q9H427 330 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 GNG12Q9UBI6 72 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 STUB1Q9UNE7 303 aa11.91□□□□□ -0.5
NEK4-206ENST00000496822 SPINT2O43291 252 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 NOL3O60936 208 aaKnown RBP11.9□□□□□ -0.5
NEK4-206ENST00000496822 PDCD6O75340 191 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 MPIG6BO95866 241 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 IGHG2P01859 326 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 FUT3P21217 361 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 IL3RAP26951 378 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 ZNF137PP52743 207 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 RPL23AP62750 156 aaKnown RBP11.9□□□□□ -0.5
NEK4-206ENST00000496822 RPS25P62851 125 aaKnown RBP11.9□□□□□ -0.5
NEK4-206ENST00000496822 Q3ZCU0 254 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 ACSM3Q53FZ2 586 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 C6orf183Q5T699 404 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 OR10K2Q6IF99 312 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 UNQ9370/PRO34162Q6UXP9 181 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 LRRTM1Q86UE6 522 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 LINC00482Q8N8I6 264 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 Q8N9W7 124 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 MRPL30Q8TCC3 161 aaKnown RBP11.9□□□□□ -0.5
NEK4-206ENST00000496822 CHPT1Q8WUD6 406 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 TMEM203Q969S6 136 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 TAF9BQ9HBM6 251 aa11.9□□□□□ -0.5
NEK4-206ENST00000496822 TRDV1A0A1B0GX56 115 aa11.89□□□□□ -0.51
NEK4-206ENST00000496822 NCBP2LA6PVI3 153 aaKnown RBP11.89□□□□□ -0.51
NEK4-206ENST00000496822 VSIG8P0DPA2 414 aa11.89□□□□□ -0.51
NEK4-206ENST00000496822 GPR12P47775 334 aa11.89□□□□□ -0.51
NEK4-206ENST00000496822 NKAPLQ5M9Q1 402 aa11.89□□□□□ -0.51
NEK4-206ENST00000496822 OR2W3Q7Z3T1 314 aa11.89□□□□□ -0.51
NEK4-206ENST00000496822 CEACAM19Q7Z692 300 aa11.89□□□□□ -0.51
NEK4-206ENST00000496822 TGIF2LXQ8IUE1 241 aa11.89□□□□□ -0.51
NEK4-206ENST00000496822 STPG2Q8N412 459 aa11.89□□□□□ -0.51
NEK4-206ENST00000496822 OR52L2PQ8NGH6 319 aa11.89□□□□□ -0.51
NEK4-206ENST00000496822 OR2T10Q8NGZ9 312 aa11.89□□□□□ -0.51
NEK4-206ENST00000496822 PLSCR3Q9NRY6 295 aa11.89□□□□□ -0.51
NEK4-206ENST00000496822 MBNL3Q9NUK0 354 aaKnown RBP11.89□□□□□ -0.51
NEK4-206ENST00000496822 AIREO43918 545 aa11.88□□□□□ -0.51
NEK4-206ENST00000496822 CA11O75493 328 aa11.88□□□□□ -0.51
NEK4-206ENST00000496822 MOSP00540 346 aa11.88□□□□□ -0.51
NEK4-206ENST00000496822 GLAP06280 429 aa11.88□□□□□ -0.51
NEK4-206ENST00000496822 MYL9P24844 172 aa11.88□□□□□ -0.51
NEK4-206ENST00000496822 CHATP28329 748 aa11.88□□□□□ -0.51
NEK4-206ENST00000496822 CD1BP29016 333 aa11.88□□□□□ -0.51
NEK4-206ENST00000496822 PPP1CCP36873 323 aaKnown RBP11.88□□□□□ -0.51
NEK4-206ENST00000496822 FABP5Q01469 135 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms