RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 THAP7Q9BT49 309 aaPredicted RBP7.16□□□□□ -1.26
U2AF1-212ENST00000496462 ABHD14AQ9BUJ0 271 aa7.16□□□□□ -1.26
U2AF1-212ENST00000496462 A0A0B4J203 849 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 TRAV40A0A0B4J280 105 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 TMEM82A0PJX8 343 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 DCTN2Q13561 401 aaKnown RBP7.15□□□□□ -1.26
U2AF1-212ENST00000496462 C9orf152Q5JTZ5 239 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 STEAP1BQ6NZ63 245 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 BRICD5Q6PL45 260 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 PLET1Q6UQ28 207 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 OR8H3Q8N146 312 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 FAM89BQ8N5H3 189 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 MAPK1IP1LQ8NDC0 245 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 OR5H6Q8NGV6 325 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 SULT4A1Q9BR01 284 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 ANXA10Q9UJ72 324 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 PSG11Q9UQ72 335 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 A0A1W2PP11 408 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 WRBO00258 174 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 UBE2E1P51965 193 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 RPS16P62249 146 aaKnown RBP7.15□□□□□ -1.26
U2AF1-212ENST00000496462 TRIM16LQ309B1 348 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 Q8NFD4 153 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 MSI2Q96DH6 328 aaKnown RBP7.15□□□□□ -1.26
U2AF1-212ENST00000496462 SEH1LQ96EE3 360 aa7.15□□□□□ -1.26
U2AF1-212ENST00000496462 M0QZK8 103 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 FCGR2CP31995 323 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 THBS3P49746 956 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 LMO4P61968 165 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 HTD2P86397 168 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 MSMO1Q15800 293 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 TMEM200BQ69YZ2 307 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 ZNF497Q6ZNH5 498 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 VMO1Q7Z5L0 202 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 OR6Q1Q8NGQ2 317 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 TCTEX1D2Q8WW35 142 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 SLC25A28Q96A46 364 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 SLC6A7Q99884 636 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 LIN7CQ9NUP9 197 aaKnown RBP7.15□□□□□ -1.27
U2AF1-212ENST00000496462 GFOD1Q9NXC2 390 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 DCAF16Q9NXF7 216 aa7.15□□□□□ -1.27
U2AF1-212ENST00000496462 CSMD2Q7Z408 3487 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 TRAV24A0A0B4J272 114 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 TUSC2O75896 110 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 FCGR3AP08637 254 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 GSTT2P0CG29 244 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 BAMBIQ13145 260 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 Q6P435 159 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 Q71RC1 249 aaPredicted RBP7.14□□□□□ -1.27
U2AF1-212ENST00000496462 TMEM229BQ8NBD8 167 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 OR5AP2Q8NGF4 316 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 CORO2AQ92828 525 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 Q9N2K0 584 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 RCC2Q9P258 522 aaKnown RBP7.14□□□□□ -1.27
U2AF1-212ENST00000496462 ZNF222Q9UK12 451 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 M0R1X1 148 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 RAB27BO00194 218 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 HRASP01112 189 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 EIF4EP06730 217 aaKnown RBP7.14□□□□□ -1.27
U2AF1-212ENST00000496462 OR8U9P0C7N5 309 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 IGHV4-31P0DP07 118 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 CFPP27918 469 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 AKR1C2P52895 323 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 SRSF7Q16629 238 aaKnown RBP eCLIP7.14□□□□□ -1.27
U2AF1-212ENST00000496462 HOGA1Q86XE5 327 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 LAX1Q8IWV1 398 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.14□□□□□ -1.27
U2AF1-212ENST00000496462 OR8U1Q8NH10 309 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 VSTM2AQ8TAG5 236 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 MALSU1Q96EH3 234 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 RASL11BQ9BPW5 248 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 PPP1R3EQ9H7J1 279 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 C19orf12Q9NSK7 152 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 RNF150Q9ULK6 438 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 IGHV3-43A0A0B4J1X8 118 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 MEIS3P1A6NDR6 274 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 F5H0A9 414 aaPredicted RBP7.14□□□□□ -1.27
U2AF1-212ENST00000496462 NPFFO15130 113 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 IGHV1-8P0DP01 117 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 IGHV3-43DP0DP04 118 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 GDNFP39905 211 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 ETV6P41212 452 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 ASPHD2Q6ICH7 369 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 SSMEM1Q8WWF3 244 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 SPIN2AQ99865 258 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 SPIN2BQ9BPZ2 258 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 SLC25A21Q9BQT8 299 aaPredicted RBP7.14□□□□□ -1.27
U2AF1-212ENST00000496462 MMP28Q9H239 520 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 PALMDQ9NP74 551 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 RDH8Q9NYR8 311 aa7.14□□□□□ -1.27
U2AF1-212ENST00000496462 IGHV1-69DA0A0B4J2H0 117 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 TCF21O43680 179 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 ZNF737O75373 536 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 IGHV1-69P01742 117 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 PDZD9Q8IXQ8 264 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 OTOGQ6ZRI0 2925 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 A0A0A6YYJ9 748 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 VWC2LB2RUY7 222 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 MFNGO00587 321 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 CTDSPLO15194 276 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms