RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 CHMP1AQ9HD42 196 aaPredicted RBP16.49■□□□□ 0.23
COL9A2-211ENST00000496215 MOB4Q9Y3A3 225 aa16.49■□□□□ 0.23
COL9A2-211ENST00000496215 A0A0A6YYD4 124 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 M0QZK8 103 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 GALP22466 123 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 REG1BP48304 166 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 CLDN12P56749 244 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 TMEM95Q3KNT9 176 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 HES5Q5TA89 166 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 Q6ZS46 218 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 SLC25A48Q6ZT89 311 aaKnown RBP16.48■□□□□ 0.23
COL9A2-211ENST00000496215 THNSL2Q86YJ6 484 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 C11orf44Q8N8P7 122 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 ZNF439Q8NDP4 499 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 FAM3DQ96BQ1 224 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 PLEKHJ1Q9NW61 149 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 STEAP1Q9UHE8 339 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 JPT1Q9UK76 154 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 LRRC42Q9Y546 428 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 NOTCH1P46531 2555 aa16.48■□□□□ 0.23
COL9A2-211ENST00000496215 TRAV1-2A0A0B4J238 106 aa16.47■□□□□ 0.23
COL9A2-211ENST00000496215 IGHV1-3A0A0C4DH29 117 aa16.47■□□□□ 0.23
COL9A2-211ENST00000496215 TRDV1A0A1B0GX56 115 aa16.47■□□□□ 0.23
COL9A2-211ENST00000496215 FAM90A9PA6NNJ1 464 aa16.47■□□□□ 0.23
COL9A2-211ENST00000496215 SLC31A2O15432 143 aa16.47■□□□□ 0.23
COL9A2-211ENST00000496215 FBXO24O75426 580 aa16.47■□□□□ 0.23
COL9A2-211ENST00000496215 TSPAN15O95858 294 aa16.47■□□□□ 0.23
COL9A2-211ENST00000496215 GAPDHP04406 335 aaKnown RBP16.47■□□□□ 0.23
COL9A2-211ENST00000496215 LPLP06858 475 aa16.47■□□□□ 0.23
COL9A2-211ENST00000496215 TMEM11P17152 192 aa16.47■□□□□ 0.23
COL9A2-211ENST00000496215 ABCA11PQ4W5N1 156 aa16.47■□□□□ 0.23
COL9A2-211ENST00000496215 ZNF773Q6PK81 442 aa16.47■□□□□ 0.23
COL9A2-211ENST00000496215 MOB1BQ7L9L4 216 aa16.47■□□□□ 0.23
COL9A2-211ENST00000496215 OR2S2Q9NQN1 319 aa16.47■□□□□ 0.23
COL9A2-211ENST00000496215 SOCS1O15524 211 aa16.46■□□□□ 0.23
COL9A2-211ENST00000496215 TXNL1O43396 289 aa16.46■□□□□ 0.23
COL9A2-211ENST00000496215 GNMTQ14749 295 aa16.46■□□□□ 0.23
COL9A2-211ENST00000496215 HMGN3Q15651 99 aa16.46■□□□□ 0.23
COL9A2-211ENST00000496215 C22orf42Q6IC83 251 aa16.46■□□□□ 0.23
COL9A2-211ENST00000496215 MOB3BQ86TA1 216 aa16.46■□□□□ 0.23
COL9A2-211ENST00000496215 RTN4IP1Q8WWV3 396 aaPredicted RBP16.46■□□□□ 0.23
COL9A2-211ENST00000496215 WNT10AQ9GZT5 417 aa16.46■□□□□ 0.23
COL9A2-211ENST00000496215 ABRACLQ9P1F3 81 aa16.46■□□□□ 0.23
COL9A2-211ENST00000496215 NAPSAO96009 420 aa16.45■□□□□ 0.22
COL9A2-211ENST00000496215 IGKV1D-33P01593 117 aa16.45■□□□□ 0.22
COL9A2-211ENST00000496215 IGKV1-33P01594 117 aa16.45■□□□□ 0.22
COL9A2-211ENST00000496215 CSF1P09603 554 aa16.45■□□□□ 0.22
COL9A2-211ENST00000496215 RAB3BP20337 219 aa16.45■□□□□ 0.22
COL9A2-211ENST00000496215 OR10A3P58181 314 aa16.45■□□□□ 0.22
COL9A2-211ENST00000496215 HTD2P86397 168 aa16.45■□□□□ 0.22
COL9A2-211ENST00000496215 IZUMO1Q8IYV9 350 aa16.45■□□□□ 0.22
COL9A2-211ENST00000496215 FAM89BQ8N5H3 189 aa16.45■□□□□ 0.22
COL9A2-211ENST00000496215 OR56B1Q8NGI3 324 aa16.45■□□□□ 0.22
COL9A2-211ENST00000496215 SETD6Q8TBK2 473 aa16.45■□□□□ 0.22
COL9A2-211ENST00000496215 GALMQ96C23 342 aa16.45■□□□□ 0.22
COL9A2-211ENST00000496215 ABHD14AQ9BUJ0 271 aa16.45■□□□□ 0.22
COL9A2-211ENST00000496215 SHISA3A0PJX4 238 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 RGS11O94810 467 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 PPP1CCP36873 323 aaKnown RBP16.44■□□□□ 0.22
COL9A2-211ENST00000496215 VEGFCP49767 419 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 ZNF137PP52743 207 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 C2orf76Q3KRA6 126 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 MORN2Q502X0 79 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 CT45A1Q5HYN5 189 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 C9orf152Q5JTZ5 239 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 TGIF2LXQ8IUE1 241 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 OR52L2PQ8NGH6 319 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 CT45A3Q8NHU0 189 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 ST6GALNAC6Q969X2 333 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 RIMS4Q9H426 269 aaPredicted RBP16.44■□□□□ 0.22
COL9A2-211ENST00000496215 C12orf4Q9NQ89 552 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 AK3Q9UIJ7 227 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 HSF4Q9ULV5 492 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 STUB1Q9UNE7 303 aa16.44■□□□□ 0.22
COL9A2-211ENST00000496215 IGHV3-72A0A0B4J1Y9 119 aa16.43■□□□□ 0.22
COL9A2-211ENST00000496215 TMEM272A0A1B0GTI8 110 aa16.43■□□□□ 0.22
COL9A2-211ENST00000496215 SH2D7A6NKC9 451 aaPredicted RBP16.43■□□□□ 0.22
COL9A2-211ENST00000496215 IFITM5A6NNB3 132 aa16.43■□□□□ 0.22
COL9A2-211ENST00000496215 FOXI3A8MTJ6 420 aaPredicted RBP16.43■□□□□ 0.22
COL9A2-211ENST00000496215 LDLRAD4O15165 306 aa16.43■□□□□ 0.22
COL9A2-211ENST00000496215 AMY1AP04745 511 aa16.43■□□□□ 0.22
COL9A2-211ENST00000496215 AMY2AP04746 511 aa16.43■□□□□ 0.22
COL9A2-211ENST00000496215 ZNF134P52741 427 aa16.43■□□□□ 0.22
COL9A2-211ENST00000496215 HNF4GQ14541 408 aa16.43■□□□□ 0.22
COL9A2-211ENST00000496215 KCTD21Q4G0X4 260 aa16.43■□□□□ 0.22
COL9A2-211ENST00000496215 STEAP3Q658P3 488 aa16.43■□□□□ 0.22
COL9A2-211ENST00000496215 LYG1Q8N1E2 194 aa16.43■□□□□ 0.22
COL9A2-211ENST00000496215 WIPF2Q8TF74 440 aaPredicted RBP16.43■□□□□ 0.22
COL9A2-211ENST00000496215 IL1F10Q8WWZ1 152 aa16.43■□□□□ 0.22
COL9A2-211ENST00000496215 ARHGAP5-AS1Q96IT6 56 aa16.43■□□□□ 0.22
COL9A2-211ENST00000496215 FGF16O43320 207 aa16.42■□□□□ 0.22
COL9A2-211ENST00000496215 CD28P10747 220 aa16.42■□□□□ 0.22
COL9A2-211ENST00000496215 ZNF880Q6PDB4 577 aa16.42■□□□□ 0.22
COL9A2-211ENST00000496215 Q6ZPA2 131 aa16.42■□□□□ 0.22
COL9A2-211ENST00000496215 C5orf24Q7Z6I8 188 aa16.42■□□□□ 0.22
COL9A2-211ENST00000496215 C5orf56Q8N8D9 126 aa16.42■□□□□ 0.22
COL9A2-211ENST00000496215 HDHD3Q9BSH5 251 aaPredicted RBP16.42■□□□□ 0.22
COL9A2-211ENST00000496215 PECRQ9BY49 303 aa16.42■□□□□ 0.22
COL9A2-211ENST00000496215 RAB22AQ9UL26 194 aa16.42■□□□□ 0.22
COL9A2-211ENST00000496215 TRBV6-6A0A0A6YYG2 114 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms