RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 MFSD2BA6NFX1 497 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 NPIPB11E5RHQ5 1161 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 HKR1P10072 659 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 ACP7Q6ZNF0 438 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 CMTM1Q8IZ96 169 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 IL1F10Q8WWZ1 152 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 TMEM56Q96MV1 263 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 MBNL3Q9NUK0 354 aaKnown RBP13.11□□□□□ -0.31
SHISA5-216ENST00000494854 UFSP2Q9NUQ7 469 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 WIPI2Q9Y4P8 454 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 TMEM56-RWDD3S4R434 201 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 CRYAAP02489 173 aa13.1□□□□□ -0.31
SHISA5-216ENST00000494854 MBPP02686 304 aaPredicted RBP13.1□□□□□ -0.31
SHISA5-216ENST00000494854 LMO1P25800 156 aa13.1□□□□□ -0.31
SHISA5-216ENST00000494854 MZT1Q08AG7 82 aa13.1□□□□□ -0.31
SHISA5-216ENST00000494854 THOC7Q6I9Y2 204 aaKnown RBP13.1□□□□□ -0.31
SHISA5-216ENST00000494854 BAP18Q8IXM2 172 aa13.1□□□□□ -0.31
SHISA5-216ENST00000494854 ANGPTL6Q8NI99 470 aa13.1□□□□□ -0.31
SHISA5-216ENST00000494854 PIGMQ9H3S5 423 aa13.1□□□□□ -0.31
SHISA5-216ENST00000494854 OR1A1Q9P1Q5 309 aa13.1□□□□□ -0.31
SHISA5-216ENST00000494854 SPEF1Q9Y4P9 236 aa13.1□□□□□ -0.31
SHISA5-216ENST00000494854 KIAA2026Q5HYC2 2103 aa13.1□□□□□ -0.31
SHISA5-216ENST00000494854 CSMD1Q96PZ7 3565 aa13.1□□□□□ -0.31
SHISA5-216ENST00000494854 A0A1B0GW55 424 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 A8MXE2 369 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 K7EPK0 472 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 PSPNO60542 156 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 DUX4L2P0CJ85 424 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 DUX4L3P0CJ86 424 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 DUX4L4P0CJ87 422 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 DUX4L5P0CJ88 424 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 DUX4L6P0CJ89 424 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 DUX4L7P0CJ90 424 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 RPL12P30050 165 aaKnown RBP13.09□□□□□ -0.31
SHISA5-216ENST00000494854 MSMPQ1L6U9 139 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 ZNF695Q8IW36 515 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 PRR18Q8N4B5 295 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 FAM71E2Q8N5Q1 922 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 OR52M1Q8NGK5 317 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 GPHA2Q96T91 129 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 USB1Q9BQ65 265 aaKnown RBP13.09□□□□□ -0.31
SHISA5-216ENST00000494854 ZC4H2Q9NQZ6 224 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 DUX4Q9UBX2 424 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 DUSP13Q9UII6 198 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 ANKRD17O75179 2603 aaKnown RBP13.09□□□□□ -0.31
SHISA5-216ENST00000494854 ZNF250P15622 560 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 GLRXP35754 106 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 HOXA4Q00056 320 aaPredicted RBP13.09□□□□□ -0.31
SHISA5-216ENST00000494854 HMGN3Q15651 99 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 LRP11Q86VZ4 500 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 SELENOHQ8IZQ5 122 aaKnown RBP13.09□□□□□ -0.31
SHISA5-216ENST00000494854 OR2Z1Q8NG97 314 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 OR10V1Q8NGI7 309 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 ZFP57Q9NU63 452 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 CCDC168Q8NDH2 2452 aa13.09□□□□□ -0.31
SHISA5-216ENST00000494854 E5RGE8 158 aa13.08□□□□□ -0.32
SHISA5-216ENST00000494854 TAAR5O14804 337 aa13.08□□□□□ -0.32
SHISA5-216ENST00000494854 PGLYRP1O75594 196 aaPredicted RBP13.08□□□□□ -0.32
SHISA5-216ENST00000494854 CDS2O95674 445 aa13.08□□□□□ -0.32
SHISA5-216ENST00000494854 UCP1P25874 307 aa13.08□□□□□ -0.32
SHISA5-216ENST00000494854 S100GP29377 79 aa13.08□□□□□ -0.32
SHISA5-216ENST00000494854 FAM27E3Q08E93 113 aa13.08□□□□□ -0.32
SHISA5-216ENST00000494854 BVESQ8NE79 360 aa13.08□□□□□ -0.32
SHISA5-216ENST00000494854 NSG2Q9Y328 171 aa13.08□□□□□ -0.32
SHISA5-216ENST00000494854 TMEM30CPA0ZSE6 113 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 H0Y980 276 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.07□□□□□ -0.32
SHISA5-216ENST00000494854 HSPA12AO43301 675 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 TNFSF12O43508 249 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 PTBP3O95758 552 aaKnown RBP13.07□□□□□ -0.32
SHISA5-216ENST00000494854 IGHV3-13P01766 116 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 CD200P41217 278 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 KRTAP10-9P60411 292 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 NKX6-1P78426 367 aaPredicted RBP13.07□□□□□ -0.32
SHISA5-216ENST00000494854 SMIM21Q3B7S5 101 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 CCDC28AQ8IWP9 274 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 OR4D5Q8NGN0 318 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 LILRB1Q8NHL6 650 aaPredicted RBP13.07□□□□□ -0.32
SHISA5-216ENST00000494854 FAM222BQ8WU58 562 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 PLEKHA2Q9HB19 425 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 TAF9BQ9HBM6 251 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 SESN1Q9Y6P5 492 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 DUXBA0A1W2PPF3 345 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 TEX46H3BTG2 121 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 KLF3P57682 345 aaPredicted RBP13.07□□□□□ -0.32
SHISA5-216ENST00000494854 TESK1Q15569 626 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 SLC35E4Q6ICL7 350 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 HSD17B13Q7Z5P4 300 aaPredicted RBP13.07□□□□□ -0.32
SHISA5-216ENST00000494854 OR5D13Q8NGL4 314 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 UBALD1Q8TB05 177 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 LRRC29Q8WV35 223 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 BARX1Q9HBU1 254 aaPredicted RBP13.07□□□□□ -0.32
SHISA5-216ENST00000494854 OR2S2Q9NQN1 319 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 CADP27708 2225 aa13.07□□□□□ -0.32
SHISA5-216ENST00000494854 IFNL4K9M1U5 179 aa13.06□□□□□ -0.32
SHISA5-216ENST00000494854 ST8SIA3O43173 380 aa13.06□□□□□ -0.32
SHISA5-216ENST00000494854 FGF2P09038 288 aa13.06□□□□□ -0.32
SHISA5-216ENST00000494854 F2RP25116 425 aa13.06□□□□□ -0.32
SHISA5-216ENST00000494854 C1QTNF12Q5T7M4 302 aa13.06□□□□□ -0.32
SHISA5-216ENST00000494854 SPIN2AQ99865 258 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms