RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 RAP2BP61225 183 aa17.08■□□□□ 0.33
KPNA1-210ENST00000494339 C14orf79Q96F83 325 aa17.08■□□□□ 0.33
KPNA1-210ENST00000494339 FXYD6Q9H0Q3 95 aa17.08■□□□□ 0.33
KPNA1-210ENST00000494339 OR6C3Q9NZP0 311 aa17.08■□□□□ 0.33
KPNA1-210ENST00000494339 ARID1AO14497 2285 aa17.08■□□□□ 0.32
KPNA1-210ENST00000494339 SLC22A5O76082 557 aa17.08■□□□□ 0.32
KPNA1-210ENST00000494339 UCP3P55916 312 aa17.08■□□□□ 0.32
KPNA1-210ENST00000494339 HERV-K104P61576 105 aa17.08■□□□□ 0.32
KPNA1-210ENST00000494339 TRAT1Q6PIZ9 186 aa17.08■□□□□ 0.32
KPNA1-210ENST00000494339 NLRC3Q7RTR2 1065 aa17.08■□□□□ 0.32
KPNA1-210ENST00000494339 TMEM230Q96A57 120 aa17.08■□□□□ 0.32
KPNA1-210ENST00000494339 MOB3AQ96BX8 217 aa17.08■□□□□ 0.32
KPNA1-210ENST00000494339 YLPM1P49750 1951 aaKnown RBP17.07■□□□□ 0.32
KPNA1-210ENST00000494339 NBPF19A0A087WUL8 3843 aa17.07■□□□□ 0.32
KPNA1-210ENST00000494339 FAM172BPA6NC97 362 aa17.07■□□□□ 0.32
KPNA1-210ENST00000494339 C15orf65H3BRN8 121 aa17.07■□□□□ 0.32
KPNA1-210ENST00000494339 DIRAS3O95661 229 aa17.07■□□□□ 0.32
KPNA1-210ENST00000494339 IGHV4-39P01824 125 aa17.07■□□□□ 0.32
KPNA1-210ENST00000494339 ZNF728P0DKX0 622 aa17.07■□□□□ 0.32
KPNA1-210ENST00000494339 GZMHP20718 246 aa17.07■□□□□ 0.32
KPNA1-210ENST00000494339 LPCAT3Q6P1A2 487 aa17.07■□□□□ 0.32
KPNA1-210ENST00000494339 TCF23Q7RTU1 214 aa17.07■□□□□ 0.32
KPNA1-210ENST00000494339 ZNF525Q8N782 197 aa17.07■□□□□ 0.32
KPNA1-210ENST00000494339 H1FXQ92522 213 aaKnown RBP17.07■□□□□ 0.32
KPNA1-210ENST00000494339 ZNF486Q96H40 463 aaPredicted RBP17.07■□□□□ 0.32
KPNA1-210ENST00000494339 NCOR1P1Q9H4R4 102 aa17.07■□□□□ 0.32
KPNA1-210ENST00000494339 NARFLQ9H6Q4 476 aa17.07■□□□□ 0.32
KPNA1-210ENST00000494339 C19orf12Q9NSK7 152 aa17.07■□□□□ 0.32
KPNA1-210ENST00000494339 TRGV10A0A0A0MS01 117 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 SPINT2O43291 252 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 RPS2P15880 293 aaKnown RBP17.06■□□□□ 0.32
KPNA1-210ENST00000494339 LTC4SQ16873 150 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 CR1LQ2VPA4 569 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 FAM53AQ6NSI3 398 aaPredicted RBP17.06■□□□□ 0.32
KPNA1-210ENST00000494339 C11orf88Q6PI97 169 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 H1FOOQ8IZA3 346 aaPredicted RBP17.06■□□□□ 0.32
KPNA1-210ENST00000494339 PTPN13Q12923 2485 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 SMLR1H3BR10 107 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 GOSR2O14653 212 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 TUSC2O75896 110 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 SFT2D2O95562 160 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 HLA-GP17693 338 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 CEACAM6P40199 344 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 GPR6P46095 362 aaPredicted RBP17.06■□□□□ 0.32
KPNA1-210ENST00000494339 RPL31P62899 125 aaKnown RBP17.06■□□□□ 0.32
KPNA1-210ENST00000494339 LIN54Q6MZP7 749 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 OR52L2PQ8NGH6 319 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 OR2T35Q8NGX2 323 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 PIPOXQ9P0Z9 390 aa17.06■□□□□ 0.32
KPNA1-210ENST00000494339 A0A0B4J2A0 478 aa17.05■□□□□ 0.32
KPNA1-210ENST00000494339 IGKV1D-13A0A0B4J2D9 117 aa17.05■□□□□ 0.32
KPNA1-210ENST00000494339 NPIPB11E5RHQ5 1161 aa17.05■□□□□ 0.32
KPNA1-210ENST00000494339 HEXAP06865 529 aa17.05■□□□□ 0.32
KPNA1-210ENST00000494339 IGKV1-13P0DP09 117 aa17.05■□□□□ 0.32
KPNA1-210ENST00000494339 OMGP23515 440 aa17.05■□□□□ 0.32
KPNA1-210ENST00000494339 GNMTQ14749 295 aa17.05■□□□□ 0.32
KPNA1-210ENST00000494339 TMEM155Q4W5P6 130 aa17.05■□□□□ 0.32
KPNA1-210ENST00000494339 SLC38A6Q8IZM9 456 aa17.05■□□□□ 0.32
KPNA1-210ENST00000494339 CHIAQ9BZP6 476 aa17.05■□□□□ 0.32
KPNA1-210ENST00000494339 PARP12Q9H0J9 701 aaKnown RBP17.05■□□□□ 0.32
KPNA1-210ENST00000494339 OR2S2Q9NQN1 319 aa17.05■□□□□ 0.32
KPNA1-210ENST00000494339 RDH8Q9NYR8 311 aa17.05■□□□□ 0.32
KPNA1-210ENST00000494339 CALYQ9NYX4 217 aa17.05■□□□□ 0.32
KPNA1-210ENST00000494339 SHPKQ9UHJ6 478 aa17.05■□□□□ 0.32
KPNA1-210ENST00000494339 MALRD1Q5VYJ5 2156 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 IGHV3-43A0A0B4J1X8 118 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 hADV38S2A0JD32 116 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 IGHV3-43DP0DP04 118 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 C2orf68Q2NKX9 166 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 CASTOR1Q8WTX7 329 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 SECTM1Q8WVN6 248 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 PSMG3-AS1Q96PY0 264 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 OR2W1Q9Y3N9 320 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 FBN2P35556 2912 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 RGS11O94810 467 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 DNASE1P24855 282 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 H2BFSP57053 126 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 ZNF273Q14593 569 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 C17orf58Q2M2W7 97 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 ZNF787Q6DD87 383 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 OR5M8Q8NGP6 311 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 MIOXQ9UGB7 285 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 OPN4Q9UHM6 478 aa17.04■□□□□ 0.32
KPNA1-210ENST00000494339 CGB3P0DN86 165 aa17.03■□□□□ 0.32
KPNA1-210ENST00000494339 CGB7P0DN87 165 aa17.03■□□□□ 0.32
KPNA1-210ENST00000494339 PPP1CCP36873 323 aaKnown RBP17.03■□□□□ 0.32
KPNA1-210ENST00000494339 SUPT4H1P63272 117 aaKnown RBP17.03■□□□□ 0.32
KPNA1-210ENST00000494339 ABCA11PQ4W5N1 156 aa17.03■□□□□ 0.32
KPNA1-210ENST00000494339 HIST2H2BCQ6DN03 193 aa17.03■□□□□ 0.32
KPNA1-210ENST00000494339 ZNF841Q6ZN19 808 aa17.03■□□□□ 0.32
KPNA1-210ENST00000494339 SGPP2Q8IWX5 399 aa17.03■□□□□ 0.32
KPNA1-210ENST00000494339 OR8B3Q8NGG8 313 aa17.03■□□□□ 0.32
KPNA1-210ENST00000494339 OR10V1Q8NGI7 309 aa17.03■□□□□ 0.32
KPNA1-210ENST00000494339 COQ8AQ8NI60 647 aa17.03■□□□□ 0.32
KPNA1-210ENST00000494339 NINJ1Q92982 152 aa17.03■□□□□ 0.32
KPNA1-210ENST00000494339 OR8B2Q96RD0 313 aa17.03■□□□□ 0.32
KPNA1-210ENST00000494339 LINC00312Q9Y6C7 94 aa17.03■□□□□ 0.32
KPNA1-210ENST00000494339 HECTD1Q9ULT8 2610 aa17.03■□□□□ 0.32
KPNA1-210ENST00000494339 KBTBD11-OT1A0A1B0GTJ5 212 aa17.02■□□□□ 0.32
KPNA1-210ENST00000494339 MEF2CQ06413 473 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms