RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 FAM3DQ96BQ1 224 aa11.73□□□□□ -0.53
ATG4B-224ENST00000494132 RBM14Q96PK6 669 aaKnown RBP11.73□□□□□ -0.53
ATG4B-224ENST00000494132 CHMP1AQ9HD42 196 aaPredicted RBP11.73□□□□□ -0.53
ATG4B-224ENST00000494132 OR2S2Q9NQN1 319 aa11.73□□□□□ -0.53
ATG4B-224ENST00000494132 MBNL3Q9NUK0 354 aaKnown RBP11.73□□□□□ -0.53
ATG4B-224ENST00000494132 PLEKHJ1Q9NW61 149 aa11.73□□□□□ -0.53
ATG4B-224ENST00000494132 KCNIP1Q9NZI2 227 aa11.73□□□□□ -0.53
ATG4B-224ENST00000494132 PKD1L1Q8TDX9 2849 aa11.73□□□□□ -0.53
ATG4B-224ENST00000494132 PLXNB1O43157 2135 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 A0A0B4J203 849 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 IGHV1-3A0A0C4DH29 117 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 TRDV1A0A1B0GX56 115 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 AMY1AP04745 511 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 AMY2AP04746 511 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 LPLP06858 475 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 TMEM11P17152 192 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 PPP1CCP36873 323 aaKnown RBP11.72□□□□□ -0.53
ATG4B-224ENST00000494132 RAB7AP51149 207 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 C2orf76Q3KRA6 126 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 CT45A1Q5HYN5 189 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 TRAT1Q6PIZ9 186 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 OR2W3Q7Z3T1 314 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 LINC00311Q8N616 119 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 CT45A3Q8NHU0 189 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 OCSTAMPQ9BR26 566 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 URM1Q9BTM9 101 aaKnown RBP11.72□□□□□ -0.53
ATG4B-224ENST00000494132 AK3Q9UIJ7 227 aa11.72□□□□□ -0.53
ATG4B-224ENST00000494132 TMEM272A0A1B0GTI8 110 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 FAM90A9PA6NNJ1 464 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 ZNF736B4DX44 427 aaPredicted RBP11.71□□□□□ -0.53
ATG4B-224ENST00000494132 H3BUI4 141 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 MRPS14O60783 128 aaKnown RBP11.71□□□□□ -0.53
ATG4B-224ENST00000494132 FBXO24O75426 580 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 FAM106CPP0CH98 169 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 MYL9P24844 172 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 TMEM50BP56557 158 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 ZNF816Q0VGE8 651 aaPredicted RBP11.71□□□□□ -0.53
ATG4B-224ENST00000494132 NSUN5P1Q3KNT7 163 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 C11orf88Q6PI97 169 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 CD200R1LQ6Q8B3 271 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 SLC25A48Q6ZT89 311 aaKnown RBP11.71□□□□□ -0.53
ATG4B-224ENST00000494132 C16orf82Q7Z2V1 217 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 OR8H3Q8N146 312 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 IL1F10Q8WWZ1 152 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 ARHGAP5-AS1Q96IT6 56 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 AKR1E2Q96JD6 320 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 STEAP1Q9UHE8 339 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 LRRC42Q9Y546 428 aa11.71□□□□□ -0.53
ATG4B-224ENST00000494132 FOXI3A8MTJ6 420 aaPredicted RBP11.7□□□□□ -0.54
ATG4B-224ENST00000494132 GAPDHP04406 335 aaKnown RBP11.7□□□□□ -0.54
ATG4B-224ENST00000494132 CSF1P09603 554 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 IL3RAP26951 378 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 HMGN3Q15651 99 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 C2orf68Q2NKX9 166 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 MOGAT2Q3SYC2 334 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 MORN2Q502X0 79 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 ZNF773Q6PK81 442 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 C10orf99Q6UWK7 81 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 NR2C2APQ86WQ0 139 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 RTN4IP1Q8WWV3 396 aaPredicted RBP11.7□□□□□ -0.54
ATG4B-224ENST00000494132 ST6GALNAC6Q969X2 333 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 CITED2Q99967 270 aaPredicted RBP11.7□□□□□ -0.54
ATG4B-224ENST00000494132 PECRQ9BY49 303 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 WNT10AQ9GZT5 417 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 MMP27Q9H306 513 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 RAB9BQ9NP90 201 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 MOB4Q9Y3A3 225 aa11.7□□□□□ -0.54
ATG4B-224ENST00000494132 A0A075B6Q4 140 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 TRAV1-2A0A0B4J238 106 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 PDCD5O14737 125 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 LDLRAD4O15165 306 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 NAPSAO96009 420 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 SLC2A2P11168 524 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-224ENST00000494132 RAB3BP20337 219 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 NEDD8Q15843 81 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 PLAC9Q5JTB6 97 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 THNSL2Q86YJ6 484 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 TGIF2LXQ8IUE1 241 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 FAM89BQ8N5H3 189 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 C8orf31Q8N9H6 132 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 DTX3Q8N9I9 347 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 WIPF2Q8TF74 440 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-224ENST00000494132 GALMQ96C23 342 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 EAF1Q96JC9 268 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-224ENST00000494132 ABHD14AQ9BUJ0 271 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 YTHDF1Q9BYJ9 559 aaKnown RBP11.69□□□□□ -0.54
ATG4B-224ENST00000494132 OR51E2Q9H255 320 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 TXNL4BQ9NX01 149 aaKnown RBP11.69□□□□□ -0.54
ATG4B-224ENST00000494132 JPT1Q9UK76 154 aa11.69□□□□□ -0.54
ATG4B-224ENST00000494132 A0A1W2PRX2 142 aa11.68□□□□□ -0.54
ATG4B-224ENST00000494132 IFITM5A6NNB3 132 aa11.68□□□□□ -0.54
ATG4B-224ENST00000494132 PSMD7P51665 324 aa11.68□□□□□ -0.54
ATG4B-224ENST00000494132 Q3ZCU0 254 aa11.68□□□□□ -0.54
ATG4B-224ENST00000494132 ZNF880Q6PDB4 577 aa11.68□□□□□ -0.54
ATG4B-224ENST00000494132 C5orf56Q8N8D9 126 aa11.68□□□□□ -0.54
ATG4B-224ENST00000494132 OR5AU1Q8NGC0 362 aa11.68□□□□□ -0.54
ATG4B-224ENST00000494132 FCGR1BQ92637 280 aa11.68□□□□□ -0.54
ATG4B-224ENST00000494132 PARP12Q9H0J9 701 aaKnown RBP11.68□□□□□ -0.54
ATG4B-224ENST00000494132 RNF167Q9H6Y7 350 aa11.68□□□□□ -0.54
ATG4B-224ENST00000494132 ABRACLQ9P1F3 81 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms