RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ATP6V0CP27449 155 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 CAMPP49913 170 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 MMDQ15546 238 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 TUSC1Q2TAM9 212 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 C1orf100Q5SVJ3 147 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 LAIR2Q6ISS4 152 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 TEPPQ6URK8 271 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 GSX1Q9H4S2 264 aaPredicted RBP16.64■□□□□ 0.25
COL27A1-207ENST00000494090 A0A0J9YW62 118 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 CRISP2P16562 243 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 GCSAMQ8N6F7 178 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 KCNK17Q96T54 332 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 CBY1Q9Y3M2 126 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 COL8A1P27658 744 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 PRDX2P32119 198 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 SHISA5Q8N114 240 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 LPAR5Q9H1C0 372 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 IGLV1-36A0A0B4J1U3 117 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 PRF1P14222 555 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 AREGP15514 252 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 G6PCP35575 357 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 SLC25A38Q96DW6 304 aa16.64■□□□□ 0.25
COL27A1-207ENST00000494090 CXorf1O96002 111 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 PGA4P0DJD7 388 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 PGA5P0DJD9 388 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 TMPRSS3P57727 454 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 CLEC2AQ6UVW9 174 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 OVCH2Q7RTZ1 564 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 IL22RA2Q969J5 263 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 OR2J1Q9GZK6 312 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 SHANK3Q9BYB0 1731 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 IGHV1-45A0A0A0MS14 117 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 CTXND1A0A1B0GTU2 59 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 FTH1P19P0C7X4 201 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 IZUMO4Q1ZYL8 232 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 ADAMTS17Q8TE56 1095 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 AMELYQ99218 206 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 TMEM191AQ9H0A3 160 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 TNFRSF19Q9NS68 423 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 K7N7A8 449 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 GAPDHP04406 335 aaKnown RBP16.63■□□□□ 0.25
COL27A1-207ENST00000494090 SMIM10L1P0DMW3 83 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 B2MP61769 119 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 SMIM10Q96HG1 83 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 MSL2Q9HCI7 577 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 TRIP12Q14669 1992 aaPredicted RBP16.63■□□□□ 0.25
COL27A1-207ENST00000494090 HPRT1P00492 218 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 G0S2P27469 103 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 MC5RP33032 325 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 CEACAM21Q3KPI0 293 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 GPR132Q9UNW8 380 aa16.63■□□□□ 0.25
COL27A1-207ENST00000494090 C4orf51C9J302 202 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 FHL5Q5TD97 284 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 UNQ9370/PRO34162Q6UXP9 181 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 ZNF519Q8TB69 540 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 TREM2Q9NZC2 230 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 KCNE5Q9UJ90 142 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 J3QR06 171 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 NMBP08949 121 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 FAM74A7A6NL05 159 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 PAGE4O60829 102 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 MMP9P14780 707 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 SULT1A2P50226 295 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 ZNF714Q96N38 554 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 PRSS1P07477 247 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 PSG4Q00888 419 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 SLC25A47Q6Q0C1 308 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 CALHM1Q8IU99 346 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 ANKRD31Q8N7Z5 1873 aa16.62■□□□□ 0.25
COL27A1-207ENST00000494090 MFSD2BA6NFX1 497 aa16.61■□□□□ 0.25
COL27A1-207ENST00000494090 SPRED2Q7Z698 418 aa16.61■□□□□ 0.25
COL27A1-207ENST00000494090 TMEM251Q8N6I4 163 aa16.61■□□□□ 0.25
COL27A1-207ENST00000494090 SSMEM1Q8WWF3 244 aa16.61■□□□□ 0.25
COL27A1-207ENST00000494090 RGP1Q92546 391 aaPredicted RBP16.61■□□□□ 0.25
COL27A1-207ENST00000494090 NDUFA2O43678 99 aa16.61■□□□□ 0.25
COL27A1-207ENST00000494090 RCC1P18754 421 aaPredicted RBP16.61■□□□□ 0.25
COL27A1-207ENST00000494090 ZXDCQ2QGD7 858 aaPredicted RBP16.61■□□□□ 0.25
COL27A1-207ENST00000494090 UCP2P55851 309 aa16.61■□□□□ 0.25
COL27A1-207ENST00000494090 COL10A1Q03692 680 aa16.61■□□□□ 0.25
COL27A1-207ENST00000494090 PACRGQ96M98 296 aaPredicted RBP16.61■□□□□ 0.25
COL27A1-207ENST00000494090 RPL7P18124 248 aaKnown RBP16.61■□□□□ 0.25
COL27A1-207ENST00000494090 AESQ08117 197 aa16.61■□□□□ 0.25
COL27A1-207ENST00000494090 WASHC3Q9Y3C0 194 aa16.61■□□□□ 0.25
COL27A1-207ENST00000494090 ZNF638Q14966 1978 aaKnown RBP16.61■□□□□ 0.25
COL27A1-207ENST00000494090 FAM90A10PA6NDY2 464 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM90A18PA6NE21 464 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM90A16PA6NEW6 464 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM90A20PA6NIJ5 464 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM90A8PA6NJQ4 464 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM90A7PA6NKC0 464 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM90A22PA8MWA6 464 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM90A12PA8MX19 464 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM90A5PA8MXJ8 464 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM90A23PA8MXZ1 464 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM90A15PP0C7V4 464 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM90A13PP0C7W8 464 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM90A14PP0C7W9 464 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM90A24PP0C7X0 464 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 H1FOOQ8IZA3 346 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-207ENST00000494090 AQP3Q92482 292 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms