RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 BCL2L10Q9HD36 194 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 DNAJB12Q9NXW2 375 aaKnown RBP9.95□□□□□ -0.82
BRCA1-222ENST00000493919 LPAR3Q9UBY5 353 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 ERG28Q9UKR5 140 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF835Q9Y2P0 537 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 USP9XQ93008 2570 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-222ENST00000493919 LOC102724200A0A096LPH7 203 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-222ENST00000493919 F8VVB4 439 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 F8VWA3 439 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 CCL21O00585 134 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 TPST2O60704 377 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 TRGC2P03986 189 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 FCGR3AP08637 254 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 ATF1P18846 271 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 PGCP20142 388 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 PSMB1P20618 241 aaKnown RBP9.95□□□□□ -0.82
BRCA1-222ENST00000493919 FUT3P21217 361 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 SOX2P48431 317 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 GFRA1P56159 465 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 B3GALT5-AS1P59052 145 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 DHRS2Q13268 280 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 LRRC10Q5BKY1 277 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 OR2T12Q8NG77 320 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF417Q8TAU3 575 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 TIMP4Q99727 224 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 GINS3Q9BRX5 216 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 GABARAPL3Q9BY60 117 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 TXNIPQ9H3M7 391 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 HSPB8Q9UJY1 196 aa9.95□□□□□ -0.82
BRCA1-222ENST00000493919 HEATR5AQ86XA9 2040 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 UNC119BA6NIH7 251 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 KIAA1324LA8MWY0 1029 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-222ENST00000493919 P2RY10O00398 339 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 HSD17B6O14756 317 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 HTR1FP30939 366 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 ELOBQ15370 118 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 MMDQ15546 238 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 EMC4Q5J8M3 183 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 RPRMLQ8N4K4 120 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 C5orf17Q8NAS9 161 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 NOXO1Q8NFA2 376 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 TAF9BQ9HBM6 251 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 FAM220BPB1ANY3 271 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 HAND1O96004 215 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF17P17021 662 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 FGF9P31371 208 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-222ENST00000493919 LHX2P50458 406 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 GINS1Q14691 196 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 P2RY6Q15077 328 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 CALHM3Q86XJ0 350 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 OR4B1Q8NGF8 309 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 APH1AQ96BI3 265 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 ABHD14AQ9BUJ0 271 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 PRDM14Q9GZV8 571 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 SMDT1Q9H4I9 107 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 PATZ1Q9HBE1 687 aaKnown RBP9.94□□□□□ -0.82
BRCA1-222ENST00000493919 Q9N2K0 584 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 B3GALT5Q9Y2C3 310 aa9.94□□□□□ -0.82
BRCA1-222ENST00000493919 LSM2Q9Y333 95 aaKnown RBP9.94□□□□□ -0.82
BRCA1-222ENST00000493919 DIDO1Q9BTC0 2240 aaKnown RBP9.93□□□□□ -0.82
BRCA1-222ENST00000493919 XRCC3O43542 346 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 GSTZ1O43708 216 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-222ENST00000493919 CSN2P05814 226 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 SFTPDP35247 375 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 CFHR2P36980 270 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 GZMMP51124 257 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 PCBP3P57721 371 aaKnown RBP9.93□□□□□ -0.82
BRCA1-222ENST00000493919 C1DQ13901 141 aaKnown RBP9.93□□□□□ -0.82
BRCA1-222ENST00000493919 CD300EQ496F6 205 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-222ENST00000493919 GLT8D1Q68CQ7 371 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 ACSM6Q6P461 480 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 UNQ5815/PRO19632Q6UWF5 114 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 NHLRC1Q6VVB1 395 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 RBPMS2Q6ZRY4 209 aaKnown RBP9.93□□□□□ -0.82
BRCA1-222ENST00000493919 NEGR1Q7Z3B1 354 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 OR5B3Q8NH48 314 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF524Q96C55 264 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 WDYHV1Q96HA8 205 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 TBX15Q96SF7 602 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 VAMP8Q9BV40 100 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 GTSF1LQ9H1H1 148 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 MOB1AQ9H8S9 216 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 BEX1Q9HBH7 125 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF319Q9P2F9 582 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF107Q9UII5 783 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-222ENST00000493919 PPIAL4AQ9Y536 164 aa9.93□□□□□ -0.82
BRCA1-222ENST00000493919 UTP20O75691 2785 aaKnown RBP9.93□□□□□ -0.82
BRCA1-222ENST00000493919 A0A0B4J2A0 478 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 A0A1W2PR80 420 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 H7BYZ3 331 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 EIF1AYO14602 144 aaKnown RBP9.92□□□□□ -0.82
BRCA1-222ENST00000493919 EEF1E1O43324 174 aaKnown RBP9.92□□□□□ -0.82
BRCA1-222ENST00000493919 MPZL2O60487 215 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 IFNA1P01562 189 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 HBZP02008 142 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ZNF708P17019 499 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 MDH2P40926 338 aaKnown RBP9.92□□□□□ -0.82
BRCA1-222ENST00000493919 EIF1AXP47813 144 aaKnown RBP9.92□□□□□ -0.82
BRCA1-222ENST00000493919 TAS2R19P59542 299 aa9.92□□□□□ -0.82
BRCA1-222ENST00000493919 ERVK11-1P61568 191 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms