RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 R4GN57 208 aa17.53■□□□□ 0.4
RNF40-203ENST00000493683 IGHV3-13P01766 116 aa17.52■□□□□ 0.4
RNF40-203ENST00000493683 IGHV3-7P01780 117 aa17.52■□□□□ 0.4
RNF40-203ENST00000493683 FGF12P61328 243 aa17.52■□□□□ 0.4
RNF40-203ENST00000493683 ROM1Q03395 351 aa17.52■□□□□ 0.4
RNF40-203ENST00000493683 LRRC75BQ2VPJ9 315 aa17.52■□□□□ 0.4
RNF40-203ENST00000493683 IGSF11Q5DX21 431 aa17.52■□□□□ 0.4
RNF40-203ENST00000493683 CALHM1Q8IU99 346 aa17.52■□□□□ 0.4
RNF40-203ENST00000493683 MRPS18BQ9Y676 258 aaKnown RBP17.52■□□□□ 0.4
RNF40-203ENST00000493683 USP54Q70EL1 1684 aa17.52■□□□□ 0.4
RNF40-203ENST00000493683 RHBDL1O75783 438 aa17.52■□□□□ 0.39
RNF40-203ENST00000493683 SMIM12Q96EX1 92 aa17.52■□□□□ 0.39
RNF40-203ENST00000493683 WIPI2Q9Y4P8 454 aa17.52■□□□□ 0.39
RNF40-203ENST00000493683 MGST3O14880 152 aa17.52■□□□□ 0.39
RNF40-203ENST00000493683 SGMS2Q8NHU3 365 aa17.52■□□□□ 0.39
RNF40-203ENST00000493683 ECM29Q5VYK3 1845 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 FAM90A26D6RGX4 464 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 C5orf67F2Z3F1 127 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 ISG15P05161 165 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 MGAT2Q10469 447 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 HOXD4P09016 255 aaPredicted RBP17.51■□□□□ 0.39
RNF40-203ENST00000493683 LIMS1P48059 325 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 GPA33Q99795 319 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 TMEM222Q9H0R3 208 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 MC5RP33032 325 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 TSPAN7P41732 249 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 NANOS3P60323 173 aaKnown RBP17.51■□□□□ 0.39
RNF40-203ENST00000493683 PMCHL1Q16048 86 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 PLPPR5Q32ZL2 321 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 C10orf111Q8N326 155 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 ABHD3Q8WU67 409 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 TMUB1Q9BVT8 246 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 SCNM1Q9BWG6 230 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 DUSP15Q9H1R2 295 aaPredicted RBP17.51■□□□□ 0.39
RNF40-203ENST00000493683 HRKO00198 91 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 VSIG10L2P0DP72 767 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 OR8A1Q8NGG7 326 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 VN1R17PQ8TDU5 208 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 PRSS27Q9BQR3 290 aa17.51■□□□□ 0.39
RNF40-203ENST00000493683 ZNF735P0CB33 412 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 CXCL2P19875 107 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 FBLIM1Q8WUP2 373 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 TBX15Q96SF7 602 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 GPR132Q9UNW8 380 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 IGHV5-10-1A0A0J9YXX1 117 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 K7N7A8 449 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 FAM222BQ8WU58 562 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 POM121Q96HA1 1249 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 UCN2Q96RP3 112 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 FOXS1O43638 330 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 NMBP08949 121 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 C1orf100Q5SVJ3 147 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 TMEM252Q8N6L7 170 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 OR4B1Q8NGF8 309 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 TAF1P21675 1872 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 CXorf65A6NEN9 183 aa17.5■□□□□ 0.39
RNF40-203ENST00000493683 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.49■□□□□ 0.39
RNF40-203ENST00000493683 HLA-DQA1P01909 254 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 MUC1P15941 1255 aaPredicted RBP17.49■□□□□ 0.39
RNF40-203ENST00000493683 RBM14Q96PK6 669 aaKnown RBP17.49■□□□□ 0.39
RNF40-203ENST00000493683 NTN1O95631 604 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 FCARP24071 287 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 PRDX2P32119 198 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 PRSS12P56730 875 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 ZNF273Q14593 569 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 HIKESHIQ53FT3 197 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 CYB561D1Q8N8Q1 229 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 PAM16Q9Y3D7 125 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 PXMP4Q9Y6I8 212 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 HLA-DQB1P01920 261 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 MGPP08493 103 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 HOXA4Q00056 320 aaPredicted RBP17.49■□□□□ 0.39
RNF40-203ENST00000493683 KCNMB1Q16558 191 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 MDP1Q86V88 176 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 CLN8Q9UBY8 286 aa17.49■□□□□ 0.39
RNF40-203ENST00000493683 B4E171 279 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 C16orf97H3BN30 126 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 IFNL4K9M1U5 179 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 SPANXN1Q5VSR9 72 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 CD200R1LQ6Q8B3 271 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 SLC25A10Q9UBX3 287 aaPredicted RBP17.48■□□□□ 0.39
RNF40-203ENST00000493683 KCNK7Q9Y2U2 307 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 PPIAL4EA0A075B759 164 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 PPIAL4DF5H284 164 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 PPIAL4FP0DN26 164 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 COMPP49747 757 aaPredicted RBP17.48■□□□□ 0.39
RNF40-203ENST00000493683 AESQ08117 197 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 SIGLEC14Q08ET2 396 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 PPIAL4AQ9Y536 164 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 EML2O95834 649 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 SFTPCP11686 197 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 ERVFRD-1P60508 538 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 PEBP1P30086 187 aaKnown RBP17.48■□□□□ 0.39
RNF40-203ENST00000493683 MEF2BQ02080 365 aaPredicted RBP17.48■□□□□ 0.39
RNF40-203ENST00000493683 COL10A1Q03692 680 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 AQP10Q96PS8 301 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 MS4A7Q9GZW8 240 aaPredicted RBP17.48■□□□□ 0.39
RNF40-203ENST00000493683 KLHDC2Q9Y2U9 406 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 DHRS7CA6NNS2 312 aa17.48■□□□□ 0.39
RNF40-203ENST00000493683 M0R3E3 92 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms