RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 SULT1C2O00338 296 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 RBBP9O75884 186 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 PMP2P02689 132 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 RCVRNP35243 200 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 MRPS10P82664 201 aaKnown RBP12.86□□□□□ -0.35
HPS4-216ENST00000493455 HERPUD1Q15011 391 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 ZNF79Q15937 498 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 KLF17Q5JT82 389 aaPredicted RBP12.86□□□□□ -0.35
HPS4-216ENST00000493455 ZNF554Q86TJ5 538 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 Q8N402 240 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 OR10A7Q8NGE5 316 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 SMIM4Q8WVI0 70 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 C22orf15Q8WYQ4 148 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 TNFRSF14Q92956 283 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 SNAPC3Q92966 411 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 CLEC7AQ9BXN2 247 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 BEX2Q9BXY8 128 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 MAST4O15021 2626 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 IGHV1-69DA0A0B4J2H0 117 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 IGHV1-69P01742 117 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 CEACAM6P40199 344 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 OR3A3P47888 321 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 LGALS4P56470 323 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 LOXL3P58215 753 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 ACTBP60709 375 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 ACTG1P63261 375 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 HCP5Q6MZN7 132 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 OR5H2Q8NGV7 314 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 OR10J5Q8NHC4 309 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 SOSTQ9BQB4 213 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 MS4A7Q9GZW8 240 aaPredicted RBP12.85□□□□□ -0.35
HPS4-216ENST00000493455 EHFQ9NZC4 300 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 ZNF69Q9UC07 566 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 JPT1Q9UK76 154 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 PSG11Q9UQ72 335 aa12.85□□□□□ -0.35
HPS4-216ENST00000493455 POM121CA8CG34 1229 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 M0QYG6 137 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 CTDSPLO15194 276 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 SLC31A2O15432 143 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 RGS11O94810 467 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 TPPPO94811 219 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 ZBTB25P24278 435 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 ETV6P41212 452 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 INPP1P49441 399 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 HTD2P86397 168 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 SRSF7Q16629 238 aaKnown RBP eCLIP12.84□□□□□ -0.35
HPS4-216ENST00000493455 STEAP3Q658P3 488 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 OR52M1Q8NGK5 317 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 OR9G1Q8NH87 305 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 THAP7Q9BT49 309 aaPredicted RBP12.84□□□□□ -0.35
HPS4-216ENST00000493455 CABLES2Q9BTV7 478 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 SRRQ9GZT4 340 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 PARP12Q9H0J9 701 aaKnown RBP12.84□□□□□ -0.35
HPS4-216ENST00000493455 LINC00574Q9H8X3 128 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 UNKLQ9H9P5 680 aaKnown RBP12.84□□□□□ -0.35
HPS4-216ENST00000493455 AKIP1Q9NQ31 210 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 NECAP2Q9NVZ3 263 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 MTFP1Q9UDX5 166 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 NUP50Q9UKX7 468 aa12.84□□□□□ -0.35
HPS4-216ENST00000493455 RBM7Q9Y580 266 aaKnown RBP12.84□□□□□ -0.35
HPS4-216ENST00000493455 SOX21Q9Y651 276 aaPredicted RBP12.84□□□□□ -0.35
HPS4-216ENST00000493455 NPFFO15130 113 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 ST8SIA5O15466 376 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 GSTZ1O43708 216 aaPredicted RBP12.83□□□□□ -0.36
HPS4-216ENST00000493455 LANCL1O43813 399 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 NFYAP23511 347 aaPredicted RBP12.83□□□□□ -0.36
HPS4-216ENST00000493455 PTBP1P26599 531 aaKnown RBP eCLIP12.83□□□□□ -0.36
HPS4-216ENST00000493455 HRH1P35367 487 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 RFX2P48378 723 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 UBE2E1P51965 193 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 PRRX1P54821 245 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 TAS2R46P59540 309 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 ZNF45Q02386 682 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 CDK10Q15131 360 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 TMEM30BQ3MIR4 351 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 MORN2Q502X0 79 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 PLA1AQ53H76 456 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 Q6ZS49 121 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 MFSD4AQ8N468 514 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 OR2AK2Q8NG84 335 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 OR5AP2Q8NGF4 316 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 OR10X1Q8NGY0 326 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 S100ZQ8WXG8 99 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 RDH8Q9NYR8 311 aa12.83□□□□□ -0.36
HPS4-216ENST00000493455 TRBV6-7A0A0A0MS04 114 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 LINC00854A0A1B0GVQ3 168 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 ZNF736B4DX44 427 aaPredicted RBP12.82□□□□□ -0.36
HPS4-216ENST00000493455 J3QR06 171 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 CD3DP04234 171 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 CSF1P09603 554 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 OR5H8P0DN80 308 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 EPHA1P21709 976 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 PAX6P26367 422 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 SAA4P35542 130 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 TRIQKQ629K1 86 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 ZNF57Q68EA5 555 aaPredicted RBP12.82□□□□□ -0.36
HPS4-216ENST00000493455 FAAP20Q6NZ36 180 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 LHFPL4Q7Z7J7 247 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 LYSMD2Q8IV50 215 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 BCL6BQ8N143 479 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms