RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 hCG_1809904A0A1W2PP81 198 aa11□□□□□ -0.65
MSH6-208ENST00000493177 A0A1W2PPE2 198 aa11□□□□□ -0.65
MSH6-208ENST00000493177 A0A1W2PR64 198 aa11□□□□□ -0.65
MSH6-208ENST00000493177 A0A1W2PRV1 198 aa11□□□□□ -0.65
MSH6-208ENST00000493177 ZNF736B4DX44 427 aaPredicted RBP11□□□□□ -0.65
MSH6-208ENST00000493177 C15orf65H3BRN8 121 aa11□□□□□ -0.65
MSH6-208ENST00000493177 HAX1O00165 279 aa11□□□□□ -0.65
MSH6-208ENST00000493177 BET1O15155 118 aa11□□□□□ -0.65
MSH6-208ENST00000493177 HSPA12AO43301 675 aa11□□□□□ -0.65
MSH6-208ENST00000493177 VENTXO95231 258 aa11□□□□□ -0.65
MSH6-208ENST00000493177 IL7P13232 177 aa11□□□□□ -0.65
MSH6-208ENST00000493177 NFYBP25208 207 aa11□□□□□ -0.65
MSH6-208ENST00000493177 TAS2R46P59540 309 aa11□□□□□ -0.65
MSH6-208ENST00000493177 TAS2R19P59542 299 aa11□□□□□ -0.65
MSH6-208ENST00000493177 AP3S2P59780 193 aa11□□□□□ -0.65
MSH6-208ENST00000493177 METTL11BQ5VVY1 283 aa11□□□□□ -0.65
MSH6-208ENST00000493177 Q6ZS49 121 aa11□□□□□ -0.65
MSH6-208ENST00000493177 ZNF554Q86TJ5 538 aa11□□□□□ -0.65
MSH6-208ENST00000493177 TMEM229BQ8NBD8 167 aa11□□□□□ -0.65
MSH6-208ENST00000493177 TRIM63Q969Q1 353 aa11□□□□□ -0.65
MSH6-208ENST00000493177 GALMQ96C23 342 aa11□□□□□ -0.65
MSH6-208ENST00000493177 MS4A7Q9GZW8 240 aaPredicted RBP11□□□□□ -0.65
MSH6-208ENST00000493177 NUP50Q9UKX7 468 aa11□□□□□ -0.65
MSH6-208ENST00000493177 POLR3KQ9Y2Y1 108 aaPredicted RBP11□□□□□ -0.65
MSH6-208ENST00000493177 RBMX2Q9Y388 322 aaKnown RBP11□□□□□ -0.65
MSH6-208ENST00000493177 CUBNO60494 3623 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 IGHV3-43A0A0B4J1X8 118 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 M0R1W7 72 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 SDCBPO00560 298 aaPredicted RBP10.99□□□□□ -0.65
MSH6-208ENST00000493177 CD3DP04234 171 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 CGB3P0DN86 165 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 CGB7P0DN87 165 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 IGHV3-43DP0DP04 118 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 NAT1P18440 290 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 HRH1P35367 487 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 DLX6P56179 175 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 ERVFRD-1P60508 538 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 PAX2Q02962 417 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 CDK10Q15131 360 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 ACTBL2Q562R1 376 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 IGSF11Q5DX21 431 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 STEAP1BQ6NZ63 245 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 C16orf87Q6PH81 154 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 ZNF782Q6ZMW2 699 aaPredicted RBP10.99□□□□□ -0.65
MSH6-208ENST00000493177 KIR3DL3Q8N743 410 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.99□□□□□ -0.65
MSH6-208ENST00000493177 OR5AP2Q8NGF4 316 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 OR52L2PQ8NGH6 319 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 OR10V1Q8NGI7 309 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 GINS4Q9BRT9 223 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 NECAP2Q9NVZ3 263 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 EHFQ9NZC4 300 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 GNG12Q9UBI6 72 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 SLC23A1Q9UHI7 598 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 KIAA2026Q5HYC2 2103 aa10.99□□□□□ -0.65
MSH6-208ENST00000493177 IGHV3OR16-10A0A075B7F0 116 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 TRAV40A0A0B4J280 105 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 ANKRD20A5PA0PJZ0 165 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 FAM172BPA6NC97 362 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 C17orf98A8MV24 154 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 NPIPB11E5RHQ5 1161 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 M0QYG6 137 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 UPK1BO75841 260 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 MMP23AO75900 390 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 RAB3DO95716 219 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 IFNA6P05013 189 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 CTXN2P0C2S0 81 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 AKAIN1P0CW23 69 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 RFX2P48378 723 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 HILS1P60008 231 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 RNASE10Q5GAN6 216 aaKnown RBP10.98□□□□□ -0.65
MSH6-208ENST00000493177 HEPN1Q6WQI6 88 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 C12orf54Q6X4T0 127 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 LYSMD2Q8IV50 215 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 OR10J5Q8NHC4 309 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 BORCS5Q969J3 196 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 DMRTB1Q96MA1 342 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 PCGF1Q9BSM1 259 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 CABLES2Q9BTV7 478 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 OR2S2Q9NQN1 319 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 SIRT7Q9NRC8 400 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 OR1A1Q9P1Q5 309 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 ZNF107Q9UII5 783 aaPredicted RBP10.98□□□□□ -0.65
MSH6-208ENST00000493177 KPTNQ9Y664 436 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 SESN1Q9Y6P5 492 aa10.98□□□□□ -0.65
MSH6-208ENST00000493177 IGKV1-6A0A0C4DH72 117 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 F2RL2O00254 374 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 TOX4O94842 621 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 OR5H8P0DN80 308 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 IGHV1-8P0DP01 117 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 TBPP20226 339 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 ZBTB25P24278 435 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 COX7A1P24310 79 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 FAUP35544 74 aaKnown RBP10.97□□□□□ -0.65
MSH6-208ENST00000493177 CEACAM6P40199 344 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 TSPAN5P62079 268 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 HTD2P86397 168 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 PRB3Q04118 309 aaPredicted RBP10.97□□□□□ -0.65
MSH6-208ENST00000493177 KLF9Q13886 244 aaPredicted RBP10.97□□□□□ -0.65
MSH6-208ENST00000493177 GNMTQ14749 295 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms