RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 MT-ND2P03891 347 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 CALCBP10092 127 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 CCL1P22362 96 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 SOX6P35712 828 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 NPBWR2P48146 333 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 RAB7AP51149 207 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 P2RX3P56373 397 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 ERVK11-1P61568 191 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 SNRPGP62308 76 aaKnown RBP4.02□□□□□ -1.77
SEC13-219ENST00000492602 TNP2Q05952 138 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 RAB40BQ12829 278 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 MADCAM1Q13477 382 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 ALKBH1Q13686 389 aaKnown RBP4.02□□□□□ -1.77
SEC13-219ENST00000492602 GALEQ14376 348 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 UBE2V2Q15819 145 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 DEFB135Q30KP9 77 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 CCDC58Q4VC31 144 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 SLC25A30Q5SVS4 291 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 PRAMEF5Q5TYX0 476 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 HEPN1Q6WQI6 88 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 POM121L12Q8N7R1 296 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 Q8N9W7 124 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 OR2G2Q8NGZ5 317 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 C11orf45Q8TAV5 145 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 GPR148Q8TDV2 347 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 THRSPQ92748 146 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 FRZBQ92765 325 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 CORO2AQ92828 525 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 NR1H4Q96RI1 486 aaPredicted RBP4.02□□□□□ -1.77
SEC13-219ENST00000492602 CIB1Q99828 191 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 CADM1Q9BY67 442 aaKnown RBP4.02□□□□□ -1.77
SEC13-219ENST00000492602 CHST6Q9GZX3 395 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 MFFQ9GZY8 342 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 METTL9Q9H1A3 318 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 ZNF286AQ9HBT8 521 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 SPACA1Q9HBV2 294 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 HMG20AQ9NP66 347 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 KCNIP1Q9NZI2 227 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 MTCH1Q9NZJ7 389 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 IL36RNQ9UBH0 155 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 OAZ3Q9UMX2 235 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 ING4Q9UNL4 249 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 COPS3Q9UNS2 423 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 LRRC42Q9Y546 428 aa4.02□□□□□ -1.77
SEC13-219ENST00000492602 VPS13BQ7Z7G8 4022 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 MEIKINA0A087WXM9 373 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 A0A1B0GTI1 187 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 KBTBD11-OT1A0A1B0GTJ5 212 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 ODAMA1E959 279 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 SAC3D1A6NKF1 404 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 MCRIP1C9JLW8 97 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 SIRPB1O00241 398 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 EBAG9O00559 213 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 SULT1B1O43704 296 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 MITFO75030 526 aaPredicted RBP4.01□□□□□ -1.77
SEC13-219ENST00000492602 ENTPD6O75354 484 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 KDM4BO94953 1096 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 BAG2O95816 211 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 IGLV3-1P01715 115 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 GAPDHP04406 335 aaKnown RBP4.01□□□□□ -1.77
SEC13-219ENST00000492602 CTRB1P17538 263 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 BCL3P20749 454 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 DUSP1P28562 367 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 CD40LGP29965 261 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 ALDH3A2P51648 485 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 SNU13P55769 128 aaKnown RBP4.01□□□□□ -1.77
SEC13-219ENST00000492602 EFNB1P98172 346 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 AESQ08117 197 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 DIAPH2-AS1Q14236 149 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 KISS1Q15726 138 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 TP53I3Q53FA7 332 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 PAN3Q58A45 887 aaKnown RBP4.01□□□□□ -1.77
SEC13-219ENST00000492602 C1orf134Q5TEV5 83 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 CTRB2Q6GPI1 263 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 FDX2Q6P4F2 183 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 IL34Q6ZMJ4 242 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 Q6ZSR3 168 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 BCDIN3DQ7Z5W3 292 aaKnown RBP4.01□□□□□ -1.77
SEC13-219ENST00000492602 LINC00596Q86U02 117 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 LHFPL3Q86UP9 236 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 RDH10Q8IZV5 341 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 OR10A7Q8NGE5 316 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 OR9G4Q8NGQ1 327 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 OR9G1Q8NH87 305 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 NEK7Q8TDX7 302 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 CASTOR1Q8WTX7 329 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 EAF1Q96JC9 268 aaPredicted RBP4.01□□□□□ -1.77
SEC13-219ENST00000492602 GABARAPL3Q9BY60 117 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 FAM192AQ9GZU8 254 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 GABARAPL1Q9H0R8 117 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 VCXQ9H320 206 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 NCOR1P1Q9H4R4 102 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 TMEM138Q9NPI0 162 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 C8orf4Q9NR00 106 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 FRRS1LQ9P0K9 344 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 SLC23A1Q9UHI7 598 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 TP53TG1Q9Y2A0 90 aa4.01□□□□□ -1.77
SEC13-219ENST00000492602 IGKV1-27A0A075B6S5 117 aa4□□□□□ -1.77
SEC13-219ENST00000492602 IGHV3-72A0A0B4J1Y9 119 aa4□□□□□ -1.77
SEC13-219ENST00000492602 H0YJX3 145 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms