RNA–Protein interactions for RNA: ENST00000491769.1

COL6A3-212, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5

Gene COL6A3, Length 6,731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-212ENST00000491769 POM121Q96HA1 1249 aa11.43□□□□□ -0.58
COL6A3-212ENST00000491769 TBX15Q96SF7 602 aa11.43□□□□□ -0.58
COL6A3-212ENST00000491769 GPA33Q99795 319 aa11.43□□□□□ -0.58
COL6A3-212ENST00000491769 TMEM191AQ9H0A3 160 aa11.43□□□□□ -0.58
COL6A3-212ENST00000491769 CDC42EP2O14613 210 aa11.43□□□□□ -0.58
COL6A3-212ENST00000491769 FOXH1O75593 365 aa11.43□□□□□ -0.58
COL6A3-212ENST00000491769 PCOLCEQ15113 449 aa11.43□□□□□ -0.58
COL6A3-212ENST00000491769 HLA-DRB5Q30154 266 aa11.43□□□□□ -0.58
COL6A3-212ENST00000491769 HMGCLL1Q8TB92 370 aa11.43□□□□□ -0.58
COL6A3-212ENST00000491769 MS4A3Q96HJ5 214 aa11.43□□□□□ -0.58
COL6A3-212ENST00000491769 ZNF253O75346 499 aa11.43□□□□□ -0.58
COL6A3-212ENST00000491769 PPP1R17O96001 155 aa11.43□□□□□ -0.58
COL6A3-212ENST00000491769 NRXN3Q9Y4C0 1643 aa11.43□□□□□ -0.58
COL6A3-212ENST00000491769 ADAP1O75689 374 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 C17orf47Q8NEP4 570 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 ZNF721Q8TF20 911 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 OIT3Q8WWZ8 545 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 NAT8Q9UHE5 227 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 A0A0J9YW62 118 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 MC5RP33032 325 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 EMP1P54849 157 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 ELOBQ15370 118 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 FAM216AQ8WUB2 273 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 A0A1W2PQF6 199 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 FCGR2BP31994 310 aaPredicted RBP11.42□□□□□ -0.58
COL6A3-212ENST00000491769 ZNF826PQ6ZT77 177 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 ZNF418Q8TF45 676 aaPredicted RBP11.42□□□□□ -0.58
COL6A3-212ENST00000491769 ZNF501Q96CX3 271 aaPredicted RBP11.42□□□□□ -0.58
COL6A3-212ENST00000491769 WDR34Q96EX3 536 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 SLC35B3Q9H1N7 401 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 PILRBQ9UKJ0 227 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 MGAT2Q10469 447 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 WNT2BQ93097 391 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 IFNL4K9M1U5 179 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 MGST3O14880 152 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 CXorf1O96002 111 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 SMIM18P0DKX4 95 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 TMEM33P57088 247 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 FAM74A4Q5TZK3 123 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 ABHD14BQ96IU4 210 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 PHLDA3Q9Y5J5 127 aa11.42□□□□□ -0.58
COL6A3-212ENST00000491769 MPC2O95563 127 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 PLAUP00749 431 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 ITLN2Q8WWU7 325 aaPredicted RBP11.41□□□□□ -0.58
COL6A3-212ENST00000491769 PGLYRP3Q96LB9 341 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 IGHV1-69-2A0A0G2JMI3 117 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 PAGE4O60829 102 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 CD81P60033 236 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 LCN2P80188 198 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 ZBTB34Q8NCN2 500 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 SGK494Q96LW2 274 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 PRSS54Q6PEW0 395 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 SCNM1Q9BWG6 230 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 P2RY1P47900 373 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 SNRPD3P62318 126 aaKnown RBP11.41□□□□□ -0.58
COL6A3-212ENST00000491769 BGLAPP02818 100 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 GCSAMQ8N6F7 178 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 LSMEM1Q8N8F7 131 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 OR10D4PQ8NGN7 298 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 Q9N2K0 584 aa11.41□□□□□ -0.58
COL6A3-212ENST00000491769 HPRT1P00492 218 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 GPX1P07203 203 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 HIST1H1BP16401 226 aaKnown RBP11.4□□□□□ -0.58
COL6A3-212ENST00000491769 MEIG1Q5JSS6 88 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 CDCP2Q5VXM1 449 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 LYRM2Q9NU23 88 aaPredicted RBP11.4□□□□□ -0.58
COL6A3-212ENST00000491769 FRRS1LQ9P0K9 344 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 HSPB8Q9UJY1 196 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 HBZP02008 142 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 APCSP02743 223 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 MFAP4P55083 255 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 ZNF56Q15929 161 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 RAXQ9Y2V3 346 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 MYO7AQ13402 2215 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 RBFOX3A6NFN3 312 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 CDRT15L2A8MXV6 281 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 ISLRO14498 428 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 MBPP02686 304 aaPredicted RBP11.4□□□□□ -0.58
COL6A3-212ENST00000491769 CTF1Q16619 201 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 PLPPR5Q32ZL2 321 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 BSXQ3C1V8 233 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 PNKDQ8N490 385 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 TOLLIPQ9H0E2 274 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 ASCC3Q8N3C0 2202 aaKnown RBP11.4□□□□□ -0.58
COL6A3-212ENST00000491769 TSPOP30536 169 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 RPL24P83731 157 aaKnown RBP11.4□□□□□ -0.58
COL6A3-212ENST00000491769 ST3GAL2Q16842 350 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 ZNF680Q8NEM1 530 aa11.4□□□□□ -0.58
COL6A3-212ENST00000491769 MARS2Q96GW9 593 aaKnown RBP11.4□□□□□ -0.58
COL6A3-212ENST00000491769 NKX2-6A6NCS4 301 aa11.4□□□□□ -0.59
COL6A3-212ENST00000491769 NDUFA2O43678 99 aa11.4□□□□□ -0.59
COL6A3-212ENST00000491769 PSG4Q00888 419 aa11.4□□□□□ -0.59
COL6A3-212ENST00000491769 ABHD12Q8N2K0 398 aa11.4□□□□□ -0.59
COL6A3-212ENST00000491769 EEF1AKMT3Q96AZ1 226 aa11.4□□□□□ -0.59
COL6A3-212ENST00000491769 SPNP16150 400 aa11.39□□□□□ -0.59
COL6A3-212ENST00000491769 AANATQ16613 207 aa11.39□□□□□ -0.59
COL6A3-212ENST00000491769 CLEC18BQ6UXF7 455 aa11.39□□□□□ -0.59
COL6A3-212ENST00000491769 SLC35E3Q7Z769 313 aa11.39□□□□□ -0.59
COL6A3-212ENST00000491769 LHFPL5Q8TAF8 219 aa11.39□□□□□ -0.59
COL6A3-212ENST00000491769 IDI2-AS1Q9NZ38 188 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms