RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 RAB11BQ15907 218 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 OR2W3Q7Z3T1 314 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 CENPVQ7Z7K6 275 aaPredicted RBP12.02□□□□□ -0.49
USP39-217ENST00000491659 ZNF439Q8NDP4 499 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 OR5AU1Q8NGC0 362 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 CITED2Q99967 270 aaPredicted RBP12.02□□□□□ -0.49
USP39-217ENST00000491659 SULT4A1Q9BR01 284 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 NICN1Q9BSH3 213 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 URM1Q9BTM9 101 aaKnown RBP12.02□□□□□ -0.49
USP39-217ENST00000491659 Q9H521 79 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 ACOT13Q9NPJ3 140 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 OR2S2Q9NQN1 319 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 AK6Q9Y3D8 172 aaKnown RBP12.02□□□□□ -0.49
USP39-217ENST00000491659 SLC31A2O15432 143 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 FGF16O43320 207 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 CD37P11049 281 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 BLVRBP30043 206 aaPredicted RBP12.01□□□□□ -0.49
USP39-217ENST00000491659 FABP5Q01469 135 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 HNF4GQ14541 408 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 FAM53AQ6NSI3 398 aaPredicted RBP12.01□□□□□ -0.49
USP39-217ENST00000491659 SLC25A48Q6ZT89 311 aaKnown RBP12.01□□□□□ -0.49
USP39-217ENST00000491659 C6orf201Q7Z4U5 140 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 TGIF2LXQ8IUE1 241 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 IZUMO1Q8IYV9 350 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 SVOPQ8N4V2 548 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 OR4F17Q8NGA8 305 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 OR4X2Q8NGF9 303 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 RTN4IP1Q8WWV3 396 aaPredicted RBP12.01□□□□□ -0.49
USP39-217ENST00000491659 OR4F4Q96R69 305 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 GFI1Q99684 422 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 CHMP1AQ9HD42 196 aaPredicted RBP12.01□□□□□ -0.49
USP39-217ENST00000491659 PLEKHJ1Q9NW61 149 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 JPT1Q9UK76 154 aa12.01□□□□□ -0.49
USP39-217ENST00000491659 IGHV3-72A0A0B4J1Y9 119 aa12□□□□□ -0.49
USP39-217ENST00000491659 MRPS14O60783 128 aaKnown RBP12□□□□□ -0.49
USP39-217ENST00000491659 RGS11O94810 467 aa12□□□□□ -0.49
USP39-217ENST00000491659 OPN1MWP04001 364 aa12□□□□□ -0.49
USP39-217ENST00000491659 OPN1MW2P0DN77 364 aa12□□□□□ -0.49
USP39-217ENST00000491659 OPN1MW3P0DN78 364 aa12□□□□□ -0.49
USP39-217ENST00000491659 PSMD7P51665 324 aa12□□□□□ -0.49
USP39-217ENST00000491659 QRFPP83859 136 aa12□□□□□ -0.49
USP39-217ENST00000491659 MOB1BQ7L9L4 216 aa12□□□□□ -0.49
USP39-217ENST00000491659 C5orf56Q8N8D9 126 aa12□□□□□ -0.49
USP39-217ENST00000491659 OR2T10Q8NGZ9 312 aa12□□□□□ -0.49
USP39-217ENST00000491659 R3HDM4Q96D70 268 aa12□□□□□ -0.49
USP39-217ENST00000491659 CYYR1Q96J86 154 aa12□□□□□ -0.49
USP39-217ENST00000491659 FAAP24Q9BTP7 215 aa12□□□□□ -0.49
USP39-217ENST00000491659 ABHD14AQ9BUJ0 271 aa12□□□□□ -0.49
USP39-217ENST00000491659 NDUFB11Q9NX14 153 aa12□□□□□ -0.49
USP39-217ENST00000491659 ABRACLQ9P1F3 81 aa12□□□□□ -0.49
USP39-217ENST00000491659 A0A0A6YYD4 124 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 PDCD5O14737 125 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 KCNAB3O43448 404 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 MYL9P24844 172 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 CD1BP29016 333 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 ZNF137PP52743 207 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 HTD2P86397 168 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 EBI3Q14213 229 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 GNMTQ14749 295 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 HMGN3Q15651 99 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 SSX1Q16384 188 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 MORN2Q502X0 79 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 CT45A1Q5HYN5 189 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 STEAP3Q658P3 488 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 OR52L2PQ8NGH6 319 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 CT45A3Q8NHU0 189 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 SETD6Q8TBK2 473 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 ST6GALNAC6Q969X2 333 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 GALMQ96C23 342 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 EAF1Q96JC9 268 aaPredicted RBP11.99□□□□□ -0.49
USP39-217ENST00000491659 LPAR5Q9H1C0 372 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 V9GY05 133 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 CMYA5Q8N3K9 4069 aa11.99□□□□□ -0.49
USP39-217ENST00000491659 TCRBV4S1A1TA0A5B7 111 aa11.98□□□□□ -0.49
USP39-217ENST00000491659 NCBP2LA6PVI3 153 aaKnown RBP11.98□□□□□ -0.49
USP39-217ENST00000491659 PPP1CCP36873 323 aaKnown RBP11.98□□□□□ -0.49
USP39-217ENST00000491659 ZNF134P52741 427 aa11.98□□□□□ -0.49
USP39-217ENST00000491659 CLDN12P56749 244 aa11.98□□□□□ -0.49
USP39-217ENST00000491659 CD83Q01151 205 aa11.98□□□□□ -0.49
USP39-217ENST00000491659 KHDC1LQ5JSQ8 128 aa11.98□□□□□ -0.49
USP39-217ENST00000491659 OR51D1Q8NGF3 324 aa11.98□□□□□ -0.49
USP39-217ENST00000491659 FAM3DQ96BQ1 224 aa11.98□□□□□ -0.49
USP39-217ENST00000491659 RIMS4Q9H426 269 aaPredicted RBP11.98□□□□□ -0.49
USP39-217ENST00000491659 A0A1W2PRX2 142 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 PSMB11A5LHX3 300 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 ADARB2-AS1A8MUL3 147 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 SERPINE3A8MV23 424 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 SOCS1O15524 211 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 LANCL1O43813 399 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 YPEL1O60688 119 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 NAPSAO96009 420 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 MOSP00540 346 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 PF4V1P10720 104 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 LY6G6FQ5SQ64 297 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 HES5Q5TA89 166 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 SLC35E3Q7Z769 313 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 C1QL4Q86Z23 238 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 FOXRED2Q8IWF2 684 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 FAM89BQ8N5H3 189 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 Q8N6K4 173 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms