RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 WDR25Q64LD2 544 aaPredicted RBP3.94□□□□□ -1.78
RTN4-215ENST00000491592 GLT8D1Q68CQ7 371 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 RPL22L1Q6P5R6 122 aaKnown RBP3.94□□□□□ -1.78
RTN4-215ENST00000491592 IL34Q6ZMJ4 242 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 OLIG3Q7RTU3 272 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 ODF3L1Q8IXM7 274 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 OR2L13Q8N349 312 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 LRRC25Q8N386 305 aaPredicted RBP3.94□□□□□ -1.78
RTN4-215ENST00000491592 SMRP1Q8NCR6 262 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 OR6T1Q8NGN1 323 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 OR1J4Q8NGS1 313 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 OR6N1Q8NGY5 312 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 OR5B3Q8NH48 314 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 OR52N5Q8NH56 324 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 IL1F10Q8WWZ1 152 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 GHSRQ92847 366 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 ARL11Q969Q4 196 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 TM4SF18Q96CE8 201 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 TMEM56Q96MV1 263 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 GINS4Q9BRT9 223 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 TMEM59Q9BXS4 323 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 TXNIPQ9H3M7 391 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 UBE2ZQ9H832 354 aaPredicted RBP3.94□□□□□ -1.78
RTN4-215ENST00000491592 ISG20L2Q9H9L3 353 aaKnown RBP3.94□□□□□ -1.78
RTN4-215ENST00000491592 RNF122Q9H9V4 155 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 PELI2Q9HAT8 420 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 EXOSC3Q9NQT5 275 aaKnown RBP3.94□□□□□ -1.78
RTN4-215ENST00000491592 CMC2Q9NRP2 79 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 CA10Q9NS85 328 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 FAM206AQ9NX38 181 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 COMMD9Q9P000 198 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 METTL1Q9UBP6 276 aaKnown RBP3.94□□□□□ -1.78
RTN4-215ENST00000491592 C19orf25Q9UFG5 118 aaPredicted RBP3.94□□□□□ -1.78
RTN4-215ENST00000491592 ZNF107Q9UII5 783 aaPredicted RBP3.94□□□□□ -1.78
RTN4-215ENST00000491592 VDAC3Q9Y277 283 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 GOLT1BQ9Y3E0 138 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 TMEM56-RWDD3S4R434 201 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 CASP8AP2Q9UKL3 1982 aa3.94□□□□□ -1.78
RTN4-215ENST00000491592 NUP210Q8TEM1 1887 aaPredicted RBP3.94□□□□□ -1.78
RTN4-215ENST00000491592 A0A0A6YYD4 124 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 A6NIN4 97 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 IFITM5A6NNB3 132 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 H7C417 338 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 J3QLW9 94 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 ERI3O43414 337 aaKnown RBP3.93□□□□□ -1.78
RTN4-215ENST00000491592 ZG16O60844 167 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 TBL1XO60907 577 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 EIF3GO75821 320 aaKnown RBP eCLIP3.93□□□□□ -1.78
RTN4-215ENST00000491592 ZNF432O94892 652 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 ZNF806P0C7X5 589 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 GKN3PP0CG01 181 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 AKAIN1P0CW23 69 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 CD79AP11912 226 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 ZNF19P17023 458 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 GABRR1P24046 479 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 PYCR1P32322 319 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 HRH1P35367 487 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 OR3A2P47893 321 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 TFPI2P48307 235 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 P2RX1P51575 399 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 TCL1AP56279 114 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 TCTAP57738 103 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 RAP1BP61224 184 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 EIF5AP63241 154 aaKnown RBP3.93□□□□□ -1.78
RTN4-215ENST00000491592 PAFAH1B2P68402 229 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 DEFA6Q01524 100 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 MFAP5Q13361 173 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 KIAA0141Q14154 515 aaPredicted RBP3.93□□□□□ -1.78
RTN4-215ENST00000491592 RBM39Q14498 530 aaKnown RBP3.93□□□□□ -1.78
RTN4-215ENST00000491592 INSL4Q14641 139 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 LAGE3Q14657 143 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 CDK5R1Q15078 307 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 RAB35Q15286 201 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 GUSBP1Q15486 140 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 ZIC1Q15915 447 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 LINC00303Q3SY05 128 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 TMEM97Q5BJF2 176 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 FFAR4Q5NUL3 377 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 CLEC12AQ5QGZ9 265 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 TMEM69Q5SWH9 247 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 DNLZQ5SXM8 178 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 OR4C11Q6IEV9 310 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 LINC01561Q8N1V8 128 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 RBMXL3Q8N7X1 1067 aaKnown RBP3.93□□□□□ -1.78
RTN4-215ENST00000491592 OR8G5Q8NG78 346 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 OR10G3Q8NGC4 313 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 OR2T27Q8NH04 317 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 ZNF502Q8TBZ5 544 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 ZPLD1Q8TCW7 415 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 TMEM255BQ8WV15 326 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 TNFAIP8L1Q8WVP5 186 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 TCTEX1D2Q8WW35 142 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 ZNF689Q96CS4 500 aaPredicted RBP3.93□□□□□ -1.78
RTN4-215ENST00000491592 PGLYRP3Q96LB9 341 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 C4orf45Q96LM5 186 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 LPAR4Q99677 370 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 SLC25A21Q9BQT8 299 aaPredicted RBP3.93□□□□□ -1.78
RTN4-215ENST00000491592 C2orf88Q9BSF0 95 aa3.93□□□□□ -1.78
RTN4-215ENST00000491592 RIOK2Q9BVS4 552 aaKnown RBP3.93□□□□□ -1.78
RTN4-215ENST00000491592 HCAR1Q9BXC0 346 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms