RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 PLPPR1Q8TBJ4 325 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 Q8TCH9 128 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 CD300LFQ8TDQ1 290 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 NPRL2Q8WTW4 380 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 TMEM171Q8WVE6 324 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 MAFIPQ8WZ33 124 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 MR1Q95460 341 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 RAB39BQ96DA2 213 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 ZNF845Q96IR2 970 aaPredicted RBP4.96□□□□□ -1.62
VPS41-214ENST00000490924 HDHD3Q9BSH5 251 aaPredicted RBP4.96□□□□□ -1.62
VPS41-214ENST00000490924 GGACTQ9BVM4 153 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 SMIM3Q9BZL3 60 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 MAGT1Q9H0U3 335 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 SMOC1Q9H4F8 434 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 TUBG2Q9NRH3 451 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 SLC7A10Q9NS82 523 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 MIOXQ9UGB7 285 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 PITPNC1Q9UKF7 332 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 LAMP3Q9UQV4 416 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 HS3ST3B1Q9Y662 390 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 MUC6Q6W4X9 2439 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 RALGAPA1Q6GYQ0 2036 aa4.96□□□□□ -1.62
VPS41-214ENST00000490924 NCOA6Q14686 2063 aaPredicted RBP4.95□□□□□ -1.62
VPS41-214ENST00000490924 hCG_1809904A0A1W2PP81 198 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 A0A1W2PR64 198 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 A0A1W2PRV1 198 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 FAM90A9PA6NNJ1 464 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 CDRT15L2A8MXV6 281 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 LINC00587B1AMM8 73 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 TRAPPC2LH3BP13 241 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 K7ESF4 209 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 PHOX2AO14813 284 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 ADAM20O43506 726 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 SPRY1O43609 319 aaPredicted RBP4.95□□□□□ -1.62
VPS41-214ENST00000490924 ANGPTL7O43827 346 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 PGLYRP1O75594 196 aaPredicted RBP4.95□□□□□ -1.62
VPS41-214ENST00000490924 SERPINA7P05543 415 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 SERPINE2P07093 398 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 PPP1CCP36873 323 aaKnown RBP4.95□□□□□ -1.62
VPS41-214ENST00000490924 CXCL12P48061 93 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 RRADP55042 308 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 PAX9P55771 341 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 FXYD4P59646 89 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 GNG3P63215 75 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 DLK1P80370 383 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 LRRC75BQ2VPJ9 315 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 PIGYQ3MUY2 71 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 SP6Q3SY56 376 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 AARDQ4LEZ3 155 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 PHLDA2Q53GA4 152 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 LYSMD4Q5XG99 296 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 ZNF324BQ6AW86 544 aaPredicted RBP4.95□□□□□ -1.62
VPS41-214ENST00000490924 GUSBP11Q6P575 273 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 PCSK4Q6UW60 755 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 ZNF818PQ6ZRF7 136 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 CYP2G1PQ6ZSU1 146 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 SLC25A26Q70HW3 274 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 NUFIP2Q7Z417 695 aaKnown RBP4.95□□□□□ -1.62
VPS41-214ENST00000490924 MRPL52Q86TS9 123 aaKnown RBP4.95□□□□□ -1.62
VPS41-214ENST00000490924 ZFP82Q8N141 532 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 MBD6Q96DN6 1003 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 ACY3Q96HD9 319 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 CIB3Q96Q77 187 aaPredicted RBP4.95□□□□□ -1.62
VPS41-214ENST00000490924 HIST1H2AAQ96QV6 131 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 IMMP2LQ96T52 175 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 SRXN1Q9BYN0 137 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 MRPL37Q9BZE1 423 aaKnown RBP4.95□□□□□ -1.62
VPS41-214ENST00000490924 SH3BGRL3Q9H299 93 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 SRD5A3Q9H8P0 318 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 CALHM2Q9HA72 323 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 MANBALQ9NQG1 85 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 GLRX2Q9NS18 164 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 DOK5Q9P104 306 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 VAX2Q9UIW0 290 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 BOKQ9UMX3 212 aaPredicted RBP4.95□□□□□ -1.62
VPS41-214ENST00000490924 FBXO7Q9Y3I1 522 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 PCNX3Q9H6A9 2034 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 SPAG17Q6Q759 2223 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 PCDH15Q96QU1 1955 aa4.95□□□□□ -1.62
VPS41-214ENST00000490924 PHF3Q92576 2039 aaKnown RBP4.94□□□□□ -1.62
VPS41-214ENST00000490924 A0A1W2PPE2 198 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 SMCO3A2RU48 225 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 FAM24AA6NFZ4 105 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 LRRC3CA6NJW4 275 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 OR5H1A6NKK0 313 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 ZNF891A8MT65 544 aaPredicted RBP4.94□□□□□ -1.62
VPS41-214ENST00000490924 MKRN2OSH3BPM6 223 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 J3QT63 122 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 DVL1O14640 695 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 SYNGR2O43760 224 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 CHST1O43916 411 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 SSSCA1O60232 199 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 HIST1H2BKO60814 126 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 WISP2O76076 250 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 TMEM50AO95807 157 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 TYMSP04818 313 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 HIST1H2BJP06899 126 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 NQO2P16083 231 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 HIST1H2BOP23527 126 aa4.94□□□□□ -1.62
VPS41-214ENST00000490924 HIST1H2BBP33778 126 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms