RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 CCRL2O00421 344 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 LDLRAD4O15165 306 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 SLC31A2O15432 143 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 FBXO24O75426 580 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 CSF1P09603 554 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 ZNF134P52741 427 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 HTD2P86397 168 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 P2RY14Q15391 338 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 RAB11BQ15907 218 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 TMEM95Q3KNT9 176 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 ABCA11PQ4W5N1 156 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 CT45A1Q5HYN5 189 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 NKAPLQ5M9Q1 402 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 C6orf201Q7Z4U5 140 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 IZUMO1Q8IYV9 350 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 SPARTQ8N0X7 666 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 SVOPQ8N4V2 548 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 CT45A3Q8NHU0 189 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 URM1Q9BTM9 101 aaKnown RBP12.11□□□□□ -0.47
COL27A1-206ENST00000490831 FAAP24Q9BTP7 215 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 KCNIP1Q9NZI2 227 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 GNG12Q9UBI6 72 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 JPT1Q9UK76 154 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 LRRC42Q9Y546 428 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 V9GY05 133 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 TRBV6-6A0A0A6YYG2 114 aa12.1□□□□□ -0.47
COL27A1-206ENST00000490831 TRDV1A0A1B0GX56 115 aa12.1□□□□□ -0.47
COL27A1-206ENST00000490831 FGF16O43320 207 aa12.1□□□□□ -0.47
COL27A1-206ENST00000490831 CD28P10747 220 aa12.1□□□□□ -0.47
COL27A1-206ENST00000490831 IL3RAP26951 378 aa12.1□□□□□ -0.47
COL27A1-206ENST00000490831 BLVRBP30043 206 aaPredicted RBP12.1□□□□□ -0.47
COL27A1-206ENST00000490831 HMGN3Q15651 99 aa12.1□□□□□ -0.47
COL27A1-206ENST00000490831 MORN2Q502X0 79 aa12.1□□□□□ -0.47
COL27A1-206ENST00000490831 Q6ZPA2 131 aa12.1□□□□□ -0.47
COL27A1-206ENST00000490831 C11orf44Q8N8P7 122 aa12.1□□□□□ -0.47
COL27A1-206ENST00000490831 OR51D1Q8NGF3 324 aa12.1□□□□□ -0.47
COL27A1-206ENST00000490831 RTN4IP1Q8WWV3 396 aaPredicted RBP12.1□□□□□ -0.47
COL27A1-206ENST00000490831 FAM3DQ96BQ1 224 aa12.1□□□□□ -0.47
COL27A1-206ENST00000490831 HSF4Q9ULV5 492 aa12.1□□□□□ -0.47
COL27A1-206ENST00000490831 SHISA3A0PJX4 238 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 ADARB2-AS1A8MUL3 147 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 SOCS1O15524 211 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 TXNL1O43396 289 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 YPEL1O60688 119 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 IGKV1D-33P01593 117 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 IGKV1-33P01594 117 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 LPLP06858 475 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 TMEM11P17152 192 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 CD1BP29016 333 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 TMEM50BP56557 158 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 ARSJQ5FYB0 599 aaPredicted RBP12.09□□□□□ -0.47
COL27A1-206ENST00000490831 MOB1BQ7L9L4 216 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 NDUFA11Q86Y39 141 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 PRR18Q8N4B5 295 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 Q8N6K4 173 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 C5orf56Q8N8D9 126 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 OR10V1Q8NGI7 309 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 FCGR1BQ92637 280 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 GALMQ96C23 342 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 YPEL2Q96QA6 119 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 RIMS4Q9H426 269 aaPredicted RBP12.09□□□□□ -0.47
COL27A1-206ENST00000490831 OR2S2Q9NQN1 319 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 PLEKHJ1Q9NW61 149 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 STEAP1Q9UHE8 339 aa12.09□□□□□ -0.47
COL27A1-206ENST00000490831 PDCD5O14737 125 aa12.08□□□□□ -0.48
COL27A1-206ENST00000490831 LANCL1O43813 399 aa12.08□□□□□ -0.48
COL27A1-206ENST00000490831 PEX14O75381 377 aa12.08□□□□□ -0.48
COL27A1-206ENST00000490831 REG1BP48304 166 aa12.08□□□□□ -0.48
COL27A1-206ENST00000490831 CLDN12P56749 244 aa12.08□□□□□ -0.48
COL27A1-206ENST00000490831 CD83Q01151 205 aa12.08□□□□□ -0.48
COL27A1-206ENST00000490831 HES1Q14469 280 aa12.08□□□□□ -0.48
COL27A1-206ENST00000490831 GNMTQ14749 295 aa12.08□□□□□ -0.48
COL27A1-206ENST00000490831 C2orf76Q3KRA6 126 aa12.08□□□□□ -0.48
COL27A1-206ENST00000490831 HIST2H2BDQ6DRA6 164 aa12.08□□□□□ -0.48
COL27A1-206ENST00000490831 C5orf24Q7Z6I8 188 aa12.08□□□□□ -0.48
COL27A1-206ENST00000490831 MOB3BQ86TA1 216 aa12.08□□□□□ -0.48
COL27A1-206ENST00000490831 OR52L2PQ8NGH6 319 aa12.08□□□□□ -0.48
COL27A1-206ENST00000490831 EAF1Q96JC9 268 aaPredicted RBP12.08□□□□□ -0.48
COL27A1-206ENST00000490831 NOTCH1P46531 2555 aa12.08□□□□□ -0.48
COL27A1-206ENST00000490831 SH2D7A6NKC9 451 aaPredicted RBP12.07□□□□□ -0.48
COL27A1-206ENST00000490831 OPN1MWP04001 364 aa12.07□□□□□ -0.48
COL27A1-206ENST00000490831 OPN1MW2P0DN77 364 aa12.07□□□□□ -0.48
COL27A1-206ENST00000490831 OPN1MW3P0DN78 364 aa12.07□□□□□ -0.48
COL27A1-206ENST00000490831 FGF9P31371 208 aaPredicted RBP12.07□□□□□ -0.48
COL27A1-206ENST00000490831 PPP1CCP36873 323 aaKnown RBP12.07□□□□□ -0.48
COL27A1-206ENST00000490831 TGIF2LXQ8IUE1 241 aa12.07□□□□□ -0.48
COL27A1-206ENST00000490831 OR5AU1Q8NGC0 362 aa12.07□□□□□ -0.48
COL27A1-206ENST00000490831 OR56B1Q8NGI3 324 aa12.07□□□□□ -0.48
COL27A1-206ENST00000490831 OR2T10Q8NGZ9 312 aa12.07□□□□□ -0.48
COL27A1-206ENST00000490831 FAM110DQ8TAY7 271 aaPredicted RBP12.07□□□□□ -0.48
COL27A1-206ENST00000490831 CITED2Q99967 270 aaPredicted RBP12.07□□□□□ -0.48
COL27A1-206ENST00000490831 ABHD14AQ9BUJ0 271 aa12.07□□□□□ -0.48
COL27A1-206ENST00000490831 RAB22AQ9UL26 194 aa12.07□□□□□ -0.48
COL27A1-206ENST00000490831 IGHV3-72A0A0B4J1Y9 119 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 TMEM272A0A1B0GTI8 110 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 IFITM5A6NNB3 132 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 RGS11O94810 467 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 MYL9P24844 172 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 OR10A3P58181 314 aa12.06□□□□□ -0.48
COL27A1-206ENST00000490831 HNF4GQ14541 408 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms