RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 VOPP1Q96AW1 172 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 ABHD14AQ9BUJ0 271 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 Q9N2K0 584 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 RPS10P5Q9NQ39 176 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 IGKV3D-15A0A087WSY6 115 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 hCG_38984A0A1B0GV85 526 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 OR10J4P0C629 311 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 F2RP25116 425 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 CHATP28329 748 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 HOGA1Q86XE5 327 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM168AQ92567 244 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 ABHD14BQ96IU4 210 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 TRBV5-7A0A0A0MS05 114 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 C17orf100A8MU93 164 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 WNT9BO14905 357 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 ADRB1P08588 477 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 DAOP14920 347 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 MUC1P15941 1255 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 ZIC4Q8N9L1 334 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 REPIN1Q9BWE0 567 aaKnown RBP12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 RAB18Q9NP72 206 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 UQCC1Q9NVA1 299 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 MED13Q9UHV7 2174 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 IL18BPO95998 194 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 LIPFP07098 398 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 ARL16Q0P5N6 197 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 SSX2Q16385 188 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 RNFT1Q5M7Z0 435 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM122CQ6P4D5 195 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 GCSAMQ8N6F7 178 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 DHRS9Q9BPW9 319 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 CALYQ9NYX4 217 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 RALYQ9UKM9 306 aaKnown RBP12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 CTDSPLO15194 276 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 LY86O95711 162 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 CST4P01036 141 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 METTL15P1P0C7V9 234 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 HTR1DP28221 377 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 ZBTB34Q8NCN2 500 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 MRPL24Q96A35 216 aaKnown RBP12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 STARD4Q96DR4 205 aa12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 ACTR3CQ9C0K3 210 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF39-205ENST00000490638 ZNF320A2RRD8 509 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 CLPSP04118 112 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 APELAP0DMC3 54 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FGF7P21781 194 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 ZNF362Q5T0B9 420 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 OR5P3Q8WZ94 311 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 GBF1Q92538 1859 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 MRGPRFQ96AM1 343 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 OR1A1Q9P1Q5 309 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 SCTP09683 121 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 SLC25A6P12236 298 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 ZNF14P17017 642 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 GLIPR1P48060 266 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 RAG2P55895 527 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 IGSF11Q5DX21 431 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 ETFRF1Q6IPR1 90 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 BAP18Q8IXM2 172 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FBLIM1Q8WUP2 373 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 MALSU1Q96EH3 234 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 PLSCR4Q9NRQ2 329 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 CLDN16Q9Y5I7 305 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 UBE2L5PA0A1B0GUS4 154 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM90A10PA6NDY2 464 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM90A18PA6NE21 464 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM90A16PA6NEW6 464 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM90A20PA6NIJ5 464 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM90A8PA6NJQ4 464 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM90A7PA6NKC0 464 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM90A22PA8MWA6 464 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM90A12PA8MX19 464 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM90A5PA8MXJ8 464 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM90A23PA8MXZ1 464 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM90A15PP0C7V4 464 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM90A13PP0C7W8 464 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM90A14PP0C7W9 464 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM90A24PP0C7X0 464 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 MGST1P10620 155 aaKnown RBP12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 UBE2G1P62253 170 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 PRR30Q53SZ7 412 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 OR1L1Q8NH94 360 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 SSX3Q99909 188 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 TPPP3Q9BW30 176 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 C1QTNF5Q9BXJ0 243 aa12.3□□□□□ -0.44
ARHGEF39-205ENST00000490638 ZNF785A8K8V0 405 aa12.29□□□□□ -0.44
ARHGEF39-205ENST00000490638 LYPD3O95274 346 aa12.29□□□□□ -0.44
ARHGEF39-205ENST00000490638 SNRNP70P08621 437 aaKnown RBP12.29□□□□□ -0.44
ARHGEF39-205ENST00000490638 SSTP61278 116 aa12.29□□□□□ -0.44
ARHGEF39-205ENST00000490638 SCMH1Q96GD3 660 aa12.29□□□□□ -0.44
ARHGEF39-205ENST00000490638 CT45A10P0DMU9 189 aa12.29□□□□□ -0.44
ARHGEF39-205ENST00000490638 TDGF1P13385 188 aa12.29□□□□□ -0.44
ARHGEF39-205ENST00000490638 NPBWR1P48145 328 aa12.29□□□□□ -0.44
ARHGEF39-205ENST00000490638 POLR2GP62487 172 aaKnown RBP eCLIP12.29□□□□□ -0.44
ARHGEF39-205ENST00000490638 RAB32Q13637 225 aa12.29□□□□□ -0.44
ARHGEF39-205ENST00000490638 ECSCRQ19T08 205 aa12.29□□□□□ -0.44
ARHGEF39-205ENST00000490638 H3F3CQ6NXT2 135 aa12.29□□□□□ -0.44
ARHGEF39-205ENST00000490638 SEZ6L2Q6UXD5 910 aa12.29□□□□□ -0.44
ARHGEF39-205ENST00000490638 SAXO1Q8IYX7 474 aa12.29□□□□□ -0.44
ARHGEF39-205ENST00000490638 TRBV23-1A0A0A0MS06 115 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms