RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 YIF1AO95070 293 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 EPPINO95925 133 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 ADRA2AP08913 450 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 NBEAP1P0C6P0 100 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 CECR9P0C854 216 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR13C7P0DN81 318 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF708P17019 499 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 HIST1H1TP22492 207 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 MPIP34949 423 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 GABRA4P48169 554 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 GFERP55789 205 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 RPL23P62829 140 aaKnown RBP2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 GNG3P63215 75 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 HPCAP84074 193 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 PSG4Q00888 419 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 ACOT6Q3I5F7 207 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 Q499Y3 187 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 ORMDL2Q53FV1 153 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 CENPWQ5EE01 88 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 UBE2NLQ5JXB2 153 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 ELP2Q6IA86 826 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 PP632Q6XCG6 107 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 Q6ZR03 302 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 DPPA2Q7Z7J5 298 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 MDP1Q86V88 176 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 TMEM86BQ8N661 226 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF615Q8N8J6 731 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR11H1Q8NG94 326 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR11H2Q8NH07 326 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR13C6PQ8NH95 151 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR10J5Q8NHC4 309 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR2A7Q96R45 310 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR52E6Q96RD3 313 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF382Q96SR6 550 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF2Q9BSG1 426 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 CHAC1Q9BUX1 264 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 EBPLQ9BY08 206 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 ULBP3Q9BZM4 244 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF355PQ9NSJ1 428 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNRD1Q9P1U0 126 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 UFC1Q9Y3C8 167 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 HDGFL3Q9Y3E1 203 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 WDR62O43379 1518 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 TET2Q6N021 2002 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 NCOA1Q15788 1441 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 CPDO75976 1380 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 IGSF9BQ9UPX0 1349 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 IGLV2-18A0A075B6J9 118 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 IGHV6-1A0A0B4J1U7 121 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 IGHV5-10-1A0A0J9YXX1 117 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 A0A1B0GVX0 72 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 C7orf66A4D0T2 115 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 FAM159BA6NKW6 160 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 C8orf87E5RJ46 101 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 COPEO14579 308 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 CCDC22O60826 627 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 KCNK2O95069 426 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 CA2P00918 260 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 CRHP06850 196 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR5G3P0C626 314 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 IGHV1-8P0DP01 117 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 IFI30P13284 250 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 NELFEP18615 380 aaKnown RBP2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 DDTP30046 118 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 GZMMP51124 257 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 DAD1P61803 113 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 FLI1Q01543 452 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 MOBPQ13875 183 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 EBPQ15125 230 aaKnown RBP2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 LY6EQ16553 131 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 SNRNP35Q16560 246 aaKnown RBP2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 FBXL19-AS1Q494R0 122 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF404Q494X3 552 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 FAM78AQ5JUQ0 283 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 NEGR1Q7Z3B1 354 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 SMIM20Q8N5G0 67 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 NATD1Q8N6N6 113 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR10K1Q8NGX5 313 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR4X1Q8NH49 305 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR10A6Q8NH74 314 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR5K1Q8NHB7 308 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 JOSD2Q8TAC2 188 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 ABHD3Q8WU67 409 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 TWIST2Q8WVJ9 160 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 DEDD2Q8WXF8 326 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 BORCS5Q969J3 196 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 BORCS7Q96B45 105 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 NEURL3Q96EH8 262 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 ACY3Q96HD9 319 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 DIRAS2Q96HU8 199 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 KCNS1Q96KK3 526 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 LINC01587Q99440 93 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 TIMM17AQ99595 171 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 HSD17B10Q99714 261 aaKnown RBP2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 ANAPC13Q9BS18 74 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 UBQLN4Q9NRR5 601 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 PSG8Q9UQ74 426 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 GINS2Q9Y248 185 aa2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 CARHSP1Q9Y2V2 147 aaKnown RBP2.78□□□□□ -1.96
HMGB1P38-201ENST00000490557 UTP11Q9Y3A2 253 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms