RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 RAB26Q9ULW5 256 aa13.89□□□□□ -0.19
SEC13-218ENST00000490283 LRRC42Q9Y546 428 aa13.89□□□□□ -0.19
SEC13-218ENST00000490283 A0A1W2PRX2 142 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 NCBP2LA6PVI3 153 aaKnown RBP13.88□□□□□ -0.19
SEC13-218ENST00000490283 RGS11O94810 467 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 AMY1AP04745 511 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 AMY2AP04746 511 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 PF4V1P10720 104 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 ARSBP15848 533 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 CHATP28329 748 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 CD83Q01151 205 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 TBCEQ15813 527 aaPredicted RBP13.88□□□□□ -0.19
SEC13-218ENST00000490283 KHDC1LQ5JSQ8 128 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 STEAP3Q658P3 488 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 ZNF367Q7RTV3 350 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 C1QL4Q86Z23 238 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 IZUMO1Q8IYV9 350 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 C5orf56Q8N8D9 126 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 MRPL30Q8TCC3 161 aaKnown RBP13.88□□□□□ -0.19
SEC13-218ENST00000490283 RTN4IP1Q8WWV3 396 aaPredicted RBP13.88□□□□□ -0.19
SEC13-218ENST00000490283 GALMQ96C23 342 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 TM2D1Q9BX74 207 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 PLEKHJ1Q9NW61 149 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 JPT1Q9UK76 154 aa13.88□□□□□ -0.19
SEC13-218ENST00000490283 TSSC4Q9Y5U2 329 aaPredicted RBP13.88□□□□□ -0.19
SEC13-218ENST00000490283 IGHV3-72A0A0B4J1Y9 119 aa13.87□□□□□ -0.19
SEC13-218ENST00000490283 PSMB11A5LHX3 300 aa13.87□□□□□ -0.19
SEC13-218ENST00000490283 CALRP27797 417 aaKnown RBP13.87□□□□□ -0.19
SEC13-218ENST00000490283 CD1BP29016 333 aa13.87□□□□□ -0.19
SEC13-218ENST00000490283 BLVRBP30043 206 aaPredicted RBP13.87□□□□□ -0.19
SEC13-218ENST00000490283 MAP2K4P45985 399 aa13.87□□□□□ -0.19
SEC13-218ENST00000490283 PSMD7P51665 324 aa13.87□□□□□ -0.19
SEC13-218ENST00000490283 RAB11BQ15907 218 aa13.87□□□□□ -0.19
SEC13-218ENST00000490283 TMEM91Q6ZNR0 172 aa13.87□□□□□ -0.19
SEC13-218ENST00000490283 OR2W3Q7Z3T1 314 aa13.87□□□□□ -0.19
SEC13-218ENST00000490283 C6orf201Q7Z4U5 140 aa13.87□□□□□ -0.19
SEC13-218ENST00000490283 FOXRED2Q8IWF2 684 aa13.87□□□□□ -0.19
SEC13-218ENST00000490283 CHPT1Q8WUD6 406 aa13.87□□□□□ -0.19
SEC13-218ENST00000490283 SULT4A1Q9BR01 284 aa13.87□□□□□ -0.19
SEC13-218ENST00000490283 Q9H521 79 aa13.87□□□□□ -0.19
SEC13-218ENST00000490283 SERPINE3A8MV23 424 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 TMEM14DPA8MWL7 114 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 SLC17A2O00624 439 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 SLC31A2O15432 143 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 MOSP00540 346 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 ZNF137PP52743 207 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 SLC35B1P78383 322 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 HTD2P86397 168 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 UNC119Q13432 240 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 EBI3Q14213 229 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 P2RY14Q15391 338 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 CT45A1Q5HYN5 189 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 FAM53AQ6NSI3 398 aaPredicted RBP13.86□□□□□ -0.19
SEC13-218ENST00000490283 MOB1BQ7L9L4 216 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 SLC35E3Q7Z769 313 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 ZNF439Q8NDP4 499 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 CT45A3Q8NHU0 189 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 SETD6Q8TBK2 473 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 ST6GALNAC6Q969X2 333 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 EAF1Q96JC9 268 aaPredicted RBP13.86□□□□□ -0.19
SEC13-218ENST00000490283 NICN1Q9BSH3 213 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 FAAP24Q9BTP7 215 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 ABHD14AQ9BUJ0 271 aa13.86□□□□□ -0.19
SEC13-218ENST00000490283 RIMS4Q9H426 269 aaPredicted RBP13.86□□□□□ -0.19
SEC13-218ENST00000490283 AK6Q9Y3D8 172 aaKnown RBP13.86□□□□□ -0.19
SEC13-218ENST00000490283 ATP6V1G2O95670 118 aa13.85□□□□□ -0.19
SEC13-218ENST00000490283 PF4P02776 101 aa13.85□□□□□ -0.19
SEC13-218ENST00000490283 MORN2Q502X0 79 aa13.85□□□□□ -0.19
SEC13-218ENST00000490283 OR8H1Q8NGG4 311 aa13.85□□□□□ -0.19
SEC13-218ENST00000490283 OR52L2PQ8NGH6 319 aa13.85□□□□□ -0.19
SEC13-218ENST00000490283 KCNK15Q9H427 330 aa13.85□□□□□ -0.19
SEC13-218ENST00000490283 STEAP1Q9UHE8 339 aa13.85□□□□□ -0.19
SEC13-218ENST00000490283 VWFP04275 2813 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 ADARB2-AS1A8MUL3 147 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 PDCD5O14737 125 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 LANCL1O43813 399 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 YPEL1O60688 119 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 CD37P11049 281 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 PPP1CCP36873 323 aaKnown RBP13.84□□□□□ -0.19
SEC13-218ENST00000490283 ZNF134P52741 427 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 QRFPP83859 136 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 FABP5Q01469 135 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 SVOPQ8N4V2 548 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 OR2AK2Q8NG84 335 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 IL1F10Q8WWZ1 152 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 YPEL2Q96QA6 119 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 RASL11BQ9BPW5 248 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 LIN7CQ9NUP9 197 aaKnown RBP13.84□□□□□ -0.19
SEC13-218ENST00000490283 MGAT4AQ9UM21 535 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 V9GY05 133 aa13.84□□□□□ -0.19
SEC13-218ENST00000490283 G3V4G9 280 aa13.83□□□□□ -0.2
SEC13-218ENST00000490283 MRPS14O60783 128 aaKnown RBP13.83□□□□□ -0.2
SEC13-218ENST00000490283 IGHG2P01859 326 aa13.83□□□□□ -0.2
SEC13-218ENST00000490283 CD33P20138 364 aa13.83□□□□□ -0.2
SEC13-218ENST00000490283 MYL9P24844 172 aa13.83□□□□□ -0.2
SEC13-218ENST00000490283 GABARAPL2P60520 117 aa13.83□□□□□ -0.2
SEC13-218ENST00000490283 GNMTQ14749 295 aa13.83□□□□□ -0.2
SEC13-218ENST00000490283 HMGN3Q15651 99 aa13.83□□□□□ -0.2
SEC13-218ENST00000490283 GON7Q9BXV9 100 aa13.83□□□□□ -0.2
SEC13-218ENST00000490283 LPAR5Q9H1C0 372 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms