RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 TRAV20A0A0B4J274 112 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 C1orf196B1AJZ1 125 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 OR2C1O95371 312 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 SRP19P09132 144 aaKnown RBP11.22□□□□□ -0.61
TNXB-206ENST00000490077 FKBP2P26885 142 aaKnown RBP11.22□□□□□ -0.61
TNXB-206ENST00000490077 RPL30P62888 115 aaKnown RBP11.22□□□□□ -0.61
TNXB-206ENST00000490077 DLK1P80370 383 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 PLGLB1Q02325 96 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 IL22RA1Q8N6P7 574 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 PRDM14Q9GZV8 571 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 RNF122Q9H9V4 155 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 KCNS2Q9ULS6 477 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 TMED3Q9Y3Q3 217 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 PLXNB1O43157 2135 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 SPTA1P02549 2419 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 IL13RA2Q14627 380 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 FAM189A2Q15884 450 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 SPRNQ5BIV9 151 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 DCAF10Q5QP82 559 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 OR8G2PQ6IF36 304 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 ZNF880Q6PDB4 577 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 GTF3AQ92664 365 aaKnown RBP11.22□□□□□ -0.61
TNXB-206ENST00000490077 YPEL4Q96NS1 127 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 TINAGQ9UJW2 476 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 KPTNQ9Y664 436 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 YKT6O15498 198 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 F2RP25116 425 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 MPV17P39210 176 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 VAMP2P63027 116 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 SSPNQ14714 243 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 RIPPLY2Q5TAB7 128 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 WDR25Q64LD2 544 aaPredicted RBP11.22□□□□□ -0.61
TNXB-206ENST00000490077 OR1L1Q8NH94 360 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 APH1AQ96BI3 265 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 IL36GQ9NZH8 169 aa11.22□□□□□ -0.61
TNXB-206ENST00000490077 MED13LQ71F56 2210 aa11.21□□□□□ -0.61
TNXB-206ENST00000490077 CER1O95813 267 aa11.21□□□□□ -0.61
TNXB-206ENST00000490077 S100A6P06703 90 aa11.21□□□□□ -0.61
TNXB-206ENST00000490077 EGR1P18146 543 aa11.21□□□□□ -0.61
TNXB-206ENST00000490077 TAGLN2P37802 199 aaKnown RBP11.21□□□□□ -0.61
TNXB-206ENST00000490077 BRWD1-AS2P59051 145 aa11.21□□□□□ -0.61
TNXB-206ENST00000490077 ZNF816Q0VGE8 651 aaPredicted RBP11.21□□□□□ -0.61
TNXB-206ENST00000490077 GPR157Q5UAW9 335 aa11.21□□□□□ -0.61
TNXB-206ENST00000490077 ABHD17BQ5VST6 288 aa11.21□□□□□ -0.61
TNXB-206ENST00000490077 MKXQ8IYA7 352 aa11.21□□□□□ -0.61
TNXB-206ENST00000490077 FAM58AQ8N1B3 248 aa11.21□□□□□ -0.61
TNXB-206ENST00000490077 OR52L2PQ8NGH6 319 aa11.21□□□□□ -0.61
TNXB-206ENST00000490077 ZDHHC16Q969W1 377 aa11.21□□□□□ -0.61
TNXB-206ENST00000490077 SPRY4Q9C004 299 aa11.21□□□□□ -0.61
TNXB-206ENST00000490077 ATP23Q9Y6H3 246 aa11.21□□□□□ -0.61
TNXB-206ENST00000490077 SLC34A2O95436 690 aa11.21□□□□□ -0.62
TNXB-206ENST00000490077 OR2H2O95918 312 aa11.21□□□□□ -0.62
TNXB-206ENST00000490077 KRASP01116 189 aa11.21□□□□□ -0.62
TNXB-206ENST00000490077 UCP1P25874 307 aa11.21□□□□□ -0.62
TNXB-206ENST00000490077 MEOX1P50221 254 aa11.21□□□□□ -0.62
TNXB-206ENST00000490077 RAB5BP61020 215 aa11.21□□□□□ -0.62
TNXB-206ENST00000490077 SPANXN5Q5MJ07 72 aa11.21□□□□□ -0.62
TNXB-206ENST00000490077 Q6P435 159 aa11.21□□□□□ -0.62
TNXB-206ENST00000490077 PLEKHF2Q9H8W4 249 aa11.21□□□□□ -0.62
TNXB-206ENST00000490077 APC2O95996 2303 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 PPIHO43447 177 aaKnown RBP11.2□□□□□ -0.62
TNXB-206ENST00000490077 LY86O95711 162 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 UCP3P55916 312 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 NDUFA6P56556 154 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 PCBD1P61457 104 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 RAB11AP62491 216 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 AESQ08117 197 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 C9orf152Q5JTZ5 239 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 UNQ6494/PRO21346Q6UXR6 183 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 ZNF429Q86V71 674 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 C15orf54Q8N8G6 183 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 SCCPDHQ8NBX0 429 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 NECAP1Q8NC96 275 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 RNASE11Q8TAA1 199 aaKnown RBP11.2□□□□□ -0.62
TNXB-206ENST00000490077 MUCL1Q96DR8 90 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 MSL2Q9HCI7 577 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 MIOXQ9UGB7 285 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 RBM7Q9Y580 266 aaKnown RBP11.2□□□□□ -0.62
TNXB-206ENST00000490077 TLN1Q9Y490 2541 aaKnown RBP11.2□□□□□ -0.62
TNXB-206ENST00000490077 SCAF4O95104 1147 aaKnown RBP11.2□□□□□ -0.62
TNXB-206ENST00000490077 IGHV2-5P01817 119 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 MT-ND4LP03901 98 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 TRGC2P03986 189 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 EIF5AP63241 154 aaKnown RBP11.2□□□□□ -0.62
TNXB-206ENST00000490077 CTAG1AP78358 180 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 RTP5Q14D33 572 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 ARL6IP1Q15041 203 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 SP5Q6BEB4 398 aaPredicted RBP11.2□□□□□ -0.62
TNXB-206ENST00000490077 CMTM1Q8IZ96 169 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 OR10V1Q8NGI7 309 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 CLN8Q9UBY8 286 aa11.2□□□□□ -0.62
TNXB-206ENST00000490077 ATRXP46100 2492 aa11.19□□□□□ -0.62
TNXB-206ENST00000490077 M0R296 226 aa11.19□□□□□ -0.62
TNXB-206ENST00000490077 DEGS1O15121 323 aa11.19□□□□□ -0.62
TNXB-206ENST00000490077 HSPA12AO43301 675 aa11.19□□□□□ -0.62
TNXB-206ENST00000490077 G6PCP35575 357 aa11.19□□□□□ -0.62
TNXB-206ENST00000490077 CEACAM6P40199 344 aa11.19□□□□□ -0.62
TNXB-206ENST00000490077 GCSAMLQ5JQS6 135 aa11.19□□□□□ -0.62
TNXB-206ENST00000490077 PRAMEF6Q5VXH4 476 aa11.19□□□□□ -0.62
TNXB-206ENST00000490077 CCDC71LQ8N9Z2 235 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms